==553684== Memcheck, a memory error detector ==553684== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==553684== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==553684== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==553684== Parent PID: 552546 ==553684== ==553684== ==553684== FILE DESCRIPTORS: 9 open (3 std) at exit. ==553684== Open file descriptor 12: ==553684== at 0xE40822D: pipe (pipe.c:29) ==553684== by 0x18A0807D: ??? ==553684== by 0x12F564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==553684== by 0xE059418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553684== by 0xDFF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553684== by 0xCCC9D38: PetscInitialize (pinit.c:924) ==553684== by 0xCB9EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==553684== by 0xCB9F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==553684== by 0x1292D3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==553684== by 0x123FC5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==553684== by 0x126EA2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==553684== by 0x126D42: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==553684== by 0x1273D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==553684== by 0x1222F5: main (TestCell.cpp:19) ==553684== ==553684== Open file descriptor 8: /dev/shm/open_mpi.0000 ==553684== at 0xE40CBCC: __open_nocancel (open64_nocancel.c:39) ==553684== by 0xE390C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==553684== by 0xDF53822: ??? ==553684== by 0xDF5396F: ??? ==553684== by 0x12FFB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==553684== by 0x12FFB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==553684== by 0x12FB1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==553684== by 0x12F562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==553684== by 0xE059418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553684== by 0xDFF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==553684== by 0xCCC9D38: PetscInitialize (pinit.c:924) ==553684== by 0xCB9EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==553684== by 0xCB9F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==553684== by 0x1292D3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==553684== by 0x123FC5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==553684== by 0x126EA2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==553684== by 0x126D42: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==553684== by 0x1273D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==553684== by 0x1222F5: main (TestCell.cpp:19) ==553684== ==553684== Open file descriptor 115: ==553684== ==553684== ==553684== Open file descriptor 111: ==553684== ==553684== ==553684== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==553684== ==553684== ==553684== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==553684== ==553684== ==553684== ==553684== HEAP SUMMARY: ==553684== in use at exit: 700,814 bytes in 9,375 blocks ==553684== total heap usage: 5,185,261 allocs, 5,175,886 frees, 1,834,225,195 bytes allocated ==553684== ==553684== LEAK SUMMARY: ==553684== definitely lost: 0 bytes in 0 blocks ==553684== indirectly lost: 0 bytes in 0 blocks ==553684== possibly lost: 0 bytes in 0 blocks ==553684== still reachable: 184 bytes in 4 blocks ==553684== suppressed: 700,630 bytes in 9,371 blocks ==553684== Reachable blocks (those to which a pointer was found) are not shown. ==553684== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==553684== ==553684== For lists of detected and suppressed errors, rerun with: -s ==553684== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)