==570827== Memcheck, a memory error detector ==570827== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==570827== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==570827== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==570827== Parent PID: 552546 ==570827== ==570827== ==570827== FILE DESCRIPTORS: 9 open (3 std) at exit. ==570827== Open file descriptor 12: ==570827== at 0xA41F22D: pipe (pipe.c:29) ==570827== by 0x13F8107D: ??? ==570827== by 0xF78D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==570827== by 0xBB17418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==570827== by 0xBAB0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==570827== by 0xA7A7D38: PetscInitialize (pinit.c:924) ==570827== by 0x9D0BFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==570827== by 0x9D0C01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==570827== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==570827== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==570827== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==570827== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==570827== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==570827== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==570827== ==570827== Open file descriptor 8: /dev/shm/open_mpi.0000 ==570827== at 0xA423BCC: __open_nocancel (open64_nocancel.c:39) ==570827== by 0xA3A7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==570827== by 0x9D40822: ??? ==570827== by 0x9D4096F: ??? ==570827== by 0xF8326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==570827== by 0xF832938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==570827== by 0xF7E8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==570827== by 0xF78D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==570827== by 0xBB17418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==570827== by 0xBAB0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==570827== by 0xA7A7D38: PetscInitialize (pinit.c:924) ==570827== by 0x9D0BFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==570827== by 0x9D0C01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==570827== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==570827== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==570827== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==570827== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==570827== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==570827== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==570827== ==570827== Open file descriptor 115: ==570827== ==570827== ==570827== Open file descriptor 111: ==570827== ==570827== ==570827== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==570827== ==570827== ==570827== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==570827== ==570827== ==570827== ==570827== HEAP SUMMARY: ==570827== in use at exit: 701,218 bytes in 9,387 blocks ==570827== total heap usage: 837,365 allocs, 827,978 frees, 1,458,889,778 bytes allocated ==570827== ==570827== LEAK SUMMARY: ==570827== definitely lost: 0 bytes in 0 blocks ==570827== indirectly lost: 0 bytes in 0 blocks ==570827== possibly lost: 0 bytes in 0 blocks ==570827== still reachable: 24 bytes in 2 blocks ==570827== suppressed: 701,194 bytes in 9,385 blocks ==570827== Reachable blocks (those to which a pointer was found) are not shown. ==570827== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==570827== ==570827== For lists of detected and suppressed errors, rerun with: -s ==570827== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)