==568309== Memcheck, a memory error detector ==568309== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==568309== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==568309== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==568309== Parent PID: 552546 ==568309== ==568309== ==568309== FILE DESCRIPTORS: 9 open (3 std) at exit. ==568309== Open file descriptor 12: ==568309== at 0x1053B22D: pipe (pipe.c:29) ==568309== by 0x1A6C807D: ??? ==568309== by 0x158C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==568309== by 0x12196418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568309== by 0x1212FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568309== by 0x10E26D38: PetscInitialize (pinit.c:924) ==568309== by 0xFD18FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==568309== by 0xFD1901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==568309== by 0x23B7D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==568309== by 0x2319A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==568309== by 0x2360DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==568309== by 0x235F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==568309== by 0x236611: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==568309== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==568309== ==568309== Open file descriptor 8: /dev/shm/open_mpi.0000 ==568309== at 0x1053FBCC: __open_nocancel (open64_nocancel.c:39) ==568309== by 0x104C3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==568309== by 0xFD4D822: ??? ==568309== by 0xFD4D96F: ??? ==568309== by 0x1596D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==568309== by 0x1596D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==568309== by 0x15923922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==568309== by 0x158C82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==568309== by 0x12196418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568309== by 0x1212FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==568309== by 0x10E26D38: PetscInitialize (pinit.c:924) ==568309== by 0xFD18FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==568309== by 0xFD1901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==568309== by 0x23B7D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==568309== by 0x2319A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==568309== by 0x2360DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==568309== by 0x235F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==568309== by 0x236611: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==568309== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==568309== ==568309== Open file descriptor 115: ==568309== ==568309== ==568309== Open file descriptor 111: ==568309== ==568309== ==568309== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==568309== ==568309== ==568309== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==568309== ==568309== ==568309== ==568309== HEAP SUMMARY: ==568309== in use at exit: 700,702 bytes in 9,374 blocks ==568309== total heap usage: 6,309,717 allocs, 6,300,343 frees, 2,072,744,986 bytes allocated ==568309== ==568309== LEAK SUMMARY: ==568309== definitely lost: 0 bytes in 0 blocks ==568309== indirectly lost: 0 bytes in 0 blocks ==568309== possibly lost: 0 bytes in 0 blocks ==568309== still reachable: 56 bytes in 3 blocks ==568309== suppressed: 700,646 bytes in 9,371 blocks ==568309== Reachable blocks (those to which a pointer was found) are not shown. ==568309== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==568309== ==568309== For lists of detected and suppressed errors, rerun with: -s ==568309== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)