==554281== Memcheck, a memory error detector ==554281== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==554281== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==554281== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==554281== Parent PID: 552546 ==554281== ==554281== ==554281== FILE DESCRIPTORS: 9 open (3 std) at exit. ==554281== Open file descriptor 12: ==554281== at 0xEC7B22D: pipe (pipe.c:29) ==554281== by 0x18A0507D: ??? ==554281== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==554281== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554281== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554281== by 0xF566D38: PetscInitialize (pinit.c:924) ==554281== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==554281== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==554281== by 0x2E2F94: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==554281== by 0x2D9549: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==554281== by 0x2DDF14: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==554281== by 0x2DDDB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==554281== by 0x2DE44B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==554281== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==554281== ==554281== Open file descriptor 8: /dev/shm/open_mpi.0000 ==554281== at 0xEC7FBCC: __open_nocancel (open64_nocancel.c:39) ==554281== by 0xEC03C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==554281== by 0xE48D822: ??? ==554281== by 0xE48D96F: ??? ==554281== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==554281== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==554281== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==554281== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==554281== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554281== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554281== by 0xF566D38: PetscInitialize (pinit.c:924) ==554281== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==554281== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==554281== by 0x2E2F94: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==554281== by 0x2D9549: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==554281== by 0x2DDF14: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==554281== by 0x2DDDB4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==554281== by 0x2DE44B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==554281== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==554281== ==554281== Open file descriptor 115: ==554281== ==554281== ==554281== Open file descriptor 111: ==554281== ==554281== ==554281== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==554281== ==554281== ==554281== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==554281== ==554281== ==554281== ==554281== HEAP SUMMARY: ==554281== in use at exit: 700,754 bytes in 9,378 blocks ==554281== total heap usage: 105,319 allocs, 95,941 frees, 1,361,246,584 bytes allocated ==554281== ==554281== LEAK SUMMARY: ==554281== definitely lost: 0 bytes in 0 blocks ==554281== indirectly lost: 0 bytes in 0 blocks ==554281== possibly lost: 0 bytes in 0 blocks ==554281== still reachable: 56 bytes in 3 blocks ==554281== suppressed: 700,698 bytes in 9,375 blocks ==554281== Reachable blocks (those to which a pointer was found) are not shown. ==554281== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==554281== ==554281== For lists of detected and suppressed errors, rerun with: -s ==554281== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)