==554296== Memcheck, a memory error detector ==554296== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==554296== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==554296== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==554296== Parent PID: 552546 ==554296== ==554296== ==554296== FILE DESCRIPTORS: 9 open (3 std) at exit. ==554296== Open file descriptor 12: ==554296== at 0xE79122D: pipe (pipe.c:29) ==554296== by 0x18A0607D: ??? ==554296== by 0x12F564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==554296== by 0xE09B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554296== by 0xE034D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554296== by 0xCD2BD38: PetscInitialize (pinit.c:924) ==554296== by 0xCB9EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==554296== by 0xCB9F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==554296== by 0x132FF7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==554296== by 0x12BA75: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==554296== by 0x12E7F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==554296== by 0x12E696: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==554296== by 0x12ED2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==554296== by 0x129DA5: main (TestPottsUpdateRules.cpp:19) ==554296== ==554296== Open file descriptor 8: /dev/shm/open_mpi.0000 ==554296== at 0xE795BCC: __open_nocancel (open64_nocancel.c:39) ==554296== by 0xE719C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==554296== by 0xCBD3822: ??? ==554296== by 0xCBD396F: ??? ==554296== by 0x12FFB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==554296== by 0x12FFB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==554296== by 0x12FB1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==554296== by 0x12F562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==554296== by 0xE09B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554296== by 0xE034D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554296== by 0xCD2BD38: PetscInitialize (pinit.c:924) ==554296== by 0xCB9EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==554296== by 0xCB9F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==554296== by 0x132FF7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==554296== by 0x12BA75: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==554296== by 0x12E7F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==554296== by 0x12E696: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==554296== by 0x12ED2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==554296== by 0x129DA5: main (TestPottsUpdateRules.cpp:19) ==554296== ==554296== Open file descriptor 115: ==554296== ==554296== ==554296== Open file descriptor 111: ==554296== ==554296== ==554296== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==554296== ==554296== ==554296== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==554296== ==554296== ==554296== ==554296== HEAP SUMMARY: ==554296== in use at exit: 700,754 bytes in 9,378 blocks ==554296== total heap usage: 69,242 allocs, 59,864 frees, 1,355,010,980 bytes allocated ==554296== ==554296== LEAK SUMMARY: ==554296== definitely lost: 0 bytes in 0 blocks ==554296== indirectly lost: 0 bytes in 0 blocks ==554296== possibly lost: 0 bytes in 0 blocks ==554296== still reachable: 56 bytes in 3 blocks ==554296== suppressed: 700,698 bytes in 9,375 blocks ==554296== Reachable blocks (those to which a pointer was found) are not shown. ==554296== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==554296== ==554296== For lists of detected and suppressed errors, rerun with: -s ==554296== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)