==567919== Memcheck, a memory error detector ==567919== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==567919== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==567919== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==567919== Parent PID: 552546 ==567919== ==567919== ==567919== FILE DESCRIPTORS: 9 open (3 std) at exit. ==567919== Open file descriptor 12: ==567919== at 0xEB5022D: pipe (pipe.c:29) ==567919== by 0x18A0707D: ??? ==567919== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==567919== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==567919== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==567919== by 0xF47FD38: PetscInitialize (pinit.c:924) ==567919== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==567919== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==567919== by 0x121CE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==567919== by 0x11D553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==567919== by 0x11F870: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==567919== by 0x11F76B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==567919== by 0x11FD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==567919== by 0x11BD55: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==567919== ==567919== Open file descriptor 8: /dev/shm/open_mpi.0000 ==567919== at 0xEB54BCC: __open_nocancel (open64_nocancel.c:39) ==567919== by 0xEAD8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==567919== by 0xE48D822: ??? ==567919== by 0xE48D96F: ??? ==567919== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==567919== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==567919== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==567919== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==567919== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==567919== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==567919== by 0xF47FD38: PetscInitialize (pinit.c:924) ==567919== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==567919== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==567919== by 0x121CE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==567919== by 0x11D553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==567919== by 0x11F870: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==567919== by 0x11F76B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==567919== by 0x11FD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==567919== by 0x11BD55: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==567919== ==567919== Open file descriptor 115: ==567919== ==567919== ==567919== Open file descriptor 111: ==567919== ==567919== ==567919== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==567919== ==567919== ==567919== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==567919== ==567919== ==567919== ==567919== HEAP SUMMARY: ==567919== in use at exit: 700,686 bytes in 9,374 blocks ==567919== total heap usage: 5,178,726 allocs, 5,169,352 frees, 1,793,370,760 bytes allocated ==567919== ==567919== LEAK SUMMARY: ==567919== definitely lost: 0 bytes in 0 blocks ==567919== indirectly lost: 0 bytes in 0 blocks ==567919== possibly lost: 0 bytes in 0 blocks ==567919== still reachable: 56 bytes in 3 blocks ==567919== suppressed: 700,630 bytes in 9,371 blocks ==567919== Reachable blocks (those to which a pointer was found) are not shown. ==567919== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==567919== ==567919== For lists of detected and suppressed errors, rerun with: -s ==567919== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)