==554313== Memcheck, a memory error detector ==554313== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==554313== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==554313== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==554313== Parent PID: 552546 ==554313== ==554313== ==554313== FILE DESCRIPTORS: 9 open (3 std) at exit. ==554313== Open file descriptor 12: ==554313== at 0x1004922D: pipe (pipe.c:29) ==554313== by 0x18A0507D: ??? ==554313== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==554313== by 0xF953418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554313== by 0xF8ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554313== by 0xE5E3D38: PetscInitialize (pinit.c:924) ==554313== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==554313== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==554313== by 0x3F57F9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==554313== by 0x3EA189: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==554313== by 0x3F01A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==554313== by 0x3F0044: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==554313== by 0x3F06DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==554313== by 0x3E8475: main (TestVertexBasedCellPopulation.cpp:19) ==554313== ==554313== Open file descriptor 8: /dev/shm/open_mpi.0000 ==554313== at 0x1004DBCC: __open_nocancel (open64_nocancel.c:39) ==554313== by 0xFFD1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==554313== by 0xE48D822: ??? ==554313== by 0xE48D96F: ??? ==554313== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==554313== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==554313== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==554313== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==554313== by 0xF953418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554313== by 0xF8ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==554313== by 0xE5E3D38: PetscInitialize (pinit.c:924) ==554313== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==554313== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==554313== by 0x3F57F9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==554313== by 0x3EA189: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==554313== by 0x3F01A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==554313== by 0x3F0044: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==554313== by 0x3F06DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==554313== by 0x3E8475: main (TestVertexBasedCellPopulation.cpp:19) ==554313== ==554313== Open file descriptor 115: ==554313== ==554313== ==554313== Open file descriptor 111: ==554313== ==554313== ==554313== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulation_valgrind.txt ==554313== ==554313== ==554313== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==554313== ==554313== ==554313== ==554313== HEAP SUMMARY: ==554313== in use at exit: 700,754 bytes in 9,378 blocks ==554313== total heap usage: 172,773 allocs, 163,395 frees, 1,365,476,004 bytes allocated ==554313== ==554313== LEAK SUMMARY: ==554313== definitely lost: 0 bytes in 0 blocks ==554313== indirectly lost: 0 bytes in 0 blocks ==554313== possibly lost: 0 bytes in 0 blocks ==554313== still reachable: 56 bytes in 3 blocks ==554313== suppressed: 700,698 bytes in 9,375 blocks ==554313== Reachable blocks (those to which a pointer was found) are not shown. ==554313== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==554313== ==554313== For lists of detected and suppressed errors, rerun with: -s ==554313== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)