==613988== Memcheck, a memory error detector ==613988== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==613988== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==613988== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==613988== Parent PID: 612413 ==613988== ==613988== ==613988== FILE DESCRIPTORS: 9 open (3 std) at exit. ==613988== Open file descriptor 12: ==613988== at 0xEB9322D: pipe (pipe.c:29) ==613988== by 0x18A0707D: ??? ==613988== by 0x1400C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==613988== by 0x107F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613988== by 0x10789D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613988== by 0xF47ED38: PetscInitialize (pinit.c:924) ==613988== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==613988== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==613988== by 0x165926: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==613988== by 0x15DD19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==613988== by 0x160EE8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==613988== by 0x160D88: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==613988== by 0x16141F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==613988== by 0x15C005: main (TestCaBasedCellPopulation.cpp:19) ==613988== ==613988== Open file descriptor 8: /dev/shm/open_mpi.0000 ==613988== at 0xEB97BCC: __open_nocancel (open64_nocancel.c:39) ==613988== by 0xEB1BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==613988== by 0xE48E822: ??? ==613988== by 0xE48E96F: ??? ==613988== by 0x140B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==613988== by 0x140B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==613988== by 0x14067922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==613988== by 0x1400C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==613988== by 0x107F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613988== by 0x10789D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613988== by 0xF47ED38: PetscInitialize (pinit.c:924) ==613988== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==613988== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==613988== by 0x165926: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==613988== by 0x15DD19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==613988== by 0x160EE8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==613988== by 0x160D88: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==613988== by 0x16141F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==613988== by 0x15C005: main (TestCaBasedCellPopulation.cpp:19) ==613988== ==613988== Open file descriptor 115: ==613988== ==613988== ==613988== Open file descriptor 111: ==613988== ==613988== ==613988== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==613988== ==613988== ==613988== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==613988== ==613988== ==613988== ==613988== HEAP SUMMARY: ==613988== in use at exit: 700,754 bytes in 9,378 blocks ==613988== total heap usage: 77,581 allocs, 68,203 frees, 1,362,419,177 bytes allocated ==613988== ==613988== LEAK SUMMARY: ==613988== definitely lost: 0 bytes in 0 blocks ==613988== indirectly lost: 0 bytes in 0 blocks ==613988== possibly lost: 0 bytes in 0 blocks ==613988== still reachable: 56 bytes in 3 blocks ==613988== suppressed: 700,698 bytes in 9,375 blocks ==613988== Reachable blocks (those to which a pointer was found) are not shown. ==613988== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==613988== ==613988== For lists of detected and suppressed errors, rerun with: -s ==613988== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)