==630668== Memcheck, a memory error detector ==630668== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==630668== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==630668== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==630668== Parent PID: 612413 ==630668== ==630668== ==630668== FILE DESCRIPTORS: 9 open (3 std) at exit. ==630668== Open file descriptor 12: ==630668== at 0xA42022D: pipe (pipe.c:29) ==630668== by 0x13F8307D: ??? ==630668== by 0xF78D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==630668== by 0xBB18418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630668== by 0xBAB1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630668== by 0xA7A8D38: PetscInitialize (pinit.c:924) ==630668== by 0x9D0CFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==630668== by 0x9D0D01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==630668== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==630668== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==630668== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==630668== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==630668== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==630668== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==630668== ==630668== Open file descriptor 8: /dev/shm/open_mpi.0000 ==630668== at 0xA424BCC: __open_nocancel (open64_nocancel.c:39) ==630668== by 0xA3A8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==630668== by 0x9D41822: ??? ==630668== by 0x9D4196F: ??? ==630668== by 0xF8326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==630668== by 0xF832938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==630668== by 0xF7E8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==630668== by 0xF78D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==630668== by 0xBB18418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630668== by 0xBAB1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630668== by 0xA7A8D38: PetscInitialize (pinit.c:924) ==630668== by 0x9D0CFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==630668== by 0x9D0D01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==630668== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==630668== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==630668== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==630668== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==630668== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==630668== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==630668== ==630668== Open file descriptor 115: ==630668== ==630668== ==630668== Open file descriptor 111: ==630668== ==630668== ==630668== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==630668== ==630668== ==630668== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==630668== ==630668== ==630668== ==630668== HEAP SUMMARY: ==630668== in use at exit: 701,218 bytes in 9,387 blocks ==630668== total heap usage: 837,367 allocs, 827,980 frees, 1,458,889,749 bytes allocated ==630668== ==630668== LEAK SUMMARY: ==630668== definitely lost: 0 bytes in 0 blocks ==630668== indirectly lost: 0 bytes in 0 blocks ==630668== possibly lost: 0 bytes in 0 blocks ==630668== still reachable: 24 bytes in 2 blocks ==630668== suppressed: 701,194 bytes in 9,385 blocks ==630668== Reachable blocks (those to which a pointer was found) are not shown. ==630668== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==630668== ==630668== For lists of detected and suppressed errors, rerun with: -s ==630668== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)