==612416== Memcheck, a memory error detector ==612416== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==612416== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==612416== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==612416== Parent PID: 612413 ==612416== ==612416== ==612416== FILE DESCRIPTORS: 9 open (3 std) at exit. ==612416== Open file descriptor 12: ==612416== at 0x4CAE22D: pipe (pipe.c:29) ==612416== by 0xAEA107D: ??? ==612416== by 0x89B54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==612416== by 0x6268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==612416== by 0x6201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==612416== by 0x4EF8D38: PetscInitialize (pinit.c:924) ==612416== by 0x48F9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==612416== by 0x48FA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==612416== by 0x11863B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==612416== by 0x118EE8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==612416== by 0x111C2A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==612416== by 0x114E54: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==612416== by 0x114D39: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==612416== by 0x114BDF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==612416== by 0x114AA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==612416== by 0x1150B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==612416== by 0x110BF5: main (TestCitations.cpp:18) ==612416== ==612416== Open file descriptor 8: /dev/shm/open_mpi.0000 ==612416== at 0x4CB2BCC: __open_nocancel (open64_nocancel.c:39) ==612416== by 0x4C36C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==612416== by 0x492E822: ??? ==612416== by 0x492E96F: ??? ==612416== by 0x8A5A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==612416== by 0x8A5A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==612416== by 0x8A10922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==612416== by 0x89B52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==612416== by 0x6268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==612416== by 0x6201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==612416== by 0x4EF8D38: PetscInitialize (pinit.c:924) ==612416== by 0x48F9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==612416== by 0x48FA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==612416== by 0x11863B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==612416== by 0x118EE8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==612416== by 0x111C2A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==612416== by 0x114E54: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==612416== by 0x114D39: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==612416== by 0x114BDF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==612416== by 0x114AA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==612416== by 0x1150B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==612416== by 0x110BF5: main (TestCitations.cpp:18) ==612416== ==612416== Open file descriptor 115: ==612416== ==612416== ==612416== Open file descriptor 111: ==612416== ==612416== ==612416== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==612416== ==612416== ==612416== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==612416== ==612416== ==612416== ==612416== HEAP SUMMARY: ==612416== in use at exit: 700,258 bytes in 9,377 blocks ==612416== total heap usage: 47,510 allocs, 38,133 frees, 1,353,408,726 bytes allocated ==612416== ==612416== LEAK SUMMARY: ==612416== definitely lost: 0 bytes in 0 blocks ==612416== indirectly lost: 0 bytes in 0 blocks ==612416== possibly lost: 0 bytes in 0 blocks ==612416== still reachable: 24 bytes in 2 blocks ==612416== suppressed: 700,234 bytes in 9,375 blocks ==612416== Reachable blocks (those to which a pointer was found) are not shown. ==612416== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==612416== ==612416== For lists of detected and suppressed errors, rerun with: -s ==612416== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)