==628169== Memcheck, a memory error detector ==628169== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==628169== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==628169== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation1d -malloc_debug -malloc_dump -memory_info ==628169== Parent PID: 612413 ==628169== ==628169== ==628169== FILE DESCRIPTORS: 9 open (3 std) at exit. ==628169== Open file descriptor 12: ==628169== at 0x1190A22D: pipe (pipe.c:29) ==628169== by 0x1A6C707D: ??? ==628169== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==628169== by 0x11214418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628169== by 0x111ADD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628169== by 0xFEA4D38: PetscInitialize (pinit.c:924) ==628169== by 0xFD19FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==628169== by 0xFD1A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==628169== by 0x2254EB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==628169== by 0x21CBB7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==628169== by 0x220694: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==628169== by 0x22058F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==628169== by 0x220BA3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==628169== by 0x21B375: main (TestCryptSimulation1d.cpp:18) ==628169== ==628169== Open file descriptor 8: /dev/shm/open_mpi.0000 ==628169== at 0x1190EBCC: __open_nocancel (open64_nocancel.c:39) ==628169== by 0x11892C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==628169== by 0xFD4E822: ??? ==628169== by 0xFD4E96F: ??? ==628169== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==628169== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==628169== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==628169== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==628169== by 0x11214418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628169== by 0x111ADD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628169== by 0xFEA4D38: PetscInitialize (pinit.c:924) ==628169== by 0xFD19FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==628169== by 0xFD1A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==628169== by 0x2254EB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==628169== by 0x21CBB7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==628169== by 0x220694: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==628169== by 0x22058F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==628169== by 0x220BA3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==628169== by 0x21B375: main (TestCryptSimulation1d.cpp:18) ==628169== ==628169== Open file descriptor 115: ==628169== ==628169== ==628169== Open file descriptor 111: ==628169== ==628169== ==628169== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation1d_valgrind.txt ==628169== ==628169== ==628169== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==628169== ==628169== ==628169== ==628169== HEAP SUMMARY: ==628169== in use at exit: 700,702 bytes in 9,374 blocks ==628169== total heap usage: 4,117,292 allocs, 4,107,918 frees, 1,993,172,465 bytes allocated ==628169== ==628169== LEAK SUMMARY: ==628169== definitely lost: 0 bytes in 0 blocks ==628169== indirectly lost: 0 bytes in 0 blocks ==628169== possibly lost: 0 bytes in 0 blocks ==628169== still reachable: 56 bytes in 3 blocks ==628169== suppressed: 700,646 bytes in 9,371 blocks ==628169== Reachable blocks (those to which a pointer was found) are not shown. ==628169== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==628169== ==628169== For lists of detected and suppressed errors, rerun with: -s ==628169== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)