==628172== Memcheck, a memory error detector ==628172== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==628172== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==628172== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==628172== Parent PID: 612413 ==628172== ==628172== ==628172== FILE DESCRIPTORS: 9 open (3 std) at exit. ==628172== Open file descriptor 12: ==628172== at 0x1053C22D: pipe (pipe.c:29) ==628172== by 0x1A6CA07D: ??? ==628172== by 0x158CA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==628172== by 0x12197418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628172== by 0x12130D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628172== by 0x10E27D38: PetscInitialize (pinit.c:924) ==628172== by 0xFD19FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==628172== by 0xFD1A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==628172== by 0x23B7D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==628172== by 0x2319A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==628172== by 0x2360DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==628172== by 0x235F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==628172== by 0x236611: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==628172== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==628172== ==628172== Open file descriptor 8: /dev/shm/open_mpi.0000 ==628172== at 0x10540BCC: __open_nocancel (open64_nocancel.c:39) ==628172== by 0x104C4C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==628172== by 0xFD4E822: ??? ==628172== by 0xFD4E96F: ??? ==628172== by 0x1596F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==628172== by 0x1596F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==628172== by 0x15925922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==628172== by 0x158CA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==628172== by 0x12197418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628172== by 0x12130D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628172== by 0x10E27D38: PetscInitialize (pinit.c:924) ==628172== by 0xFD19FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==628172== by 0xFD1A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==628172== by 0x23B7D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==628172== by 0x2319A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==628172== by 0x2360DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==628172== by 0x235F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==628172== by 0x236611: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==628172== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==628172== ==628172== Open file descriptor 115: ==628172== ==628172== ==628172== Open file descriptor 111: ==628172== ==628172== ==628172== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==628172== ==628172== ==628172== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==628172== ==628172== ==628172== ==628172== HEAP SUMMARY: ==628172== in use at exit: 700,702 bytes in 9,374 blocks ==628172== total heap usage: 6,309,727 allocs, 6,300,353 frees, 2,072,745,828 bytes allocated ==628172== ==628172== LEAK SUMMARY: ==628172== definitely lost: 0 bytes in 0 blocks ==628172== indirectly lost: 0 bytes in 0 blocks ==628172== possibly lost: 0 bytes in 0 blocks ==628172== still reachable: 56 bytes in 3 blocks ==628172== suppressed: 700,646 bytes in 9,371 blocks ==628172== Reachable blocks (those to which a pointer was found) are not shown. ==628172== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==628172== ==628172== For lists of detected and suppressed errors, rerun with: -s ==628172== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)