==613953== Memcheck, a memory error detector ==613953== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==613953== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==613953== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==613953== Parent PID: 612413 ==613953== ==613953== ==613953== FILE DESCRIPTORS: 9 open (3 std) at exit. ==613953== Open file descriptor 12: ==613953== at 0xE68F22D: pipe (pipe.c:29) ==613953== by 0x18A0607D: ??? ==613953== by 0x12FA84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==613953== by 0xE2DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613953== by 0xE277D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613953== by 0xCF6ED38: PetscInitialize (pinit.c:924) ==613953== by 0xCDE3FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==613953== by 0xCDE401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==613953== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==613953== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==613953== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==613953== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==613953== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==613953== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==613953== ==613953== Open file descriptor 8: /dev/shm/open_mpi.0000 ==613953== at 0xE693BCC: __open_nocancel (open64_nocancel.c:39) ==613953== by 0xE617C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==613953== by 0xCE18822: ??? ==613953== by 0xCE1896F: ??? ==613953== by 0x1304D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==613953== by 0x1304D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==613953== by 0x13003922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==613953== by 0x12FA82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==613953== by 0xE2DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613953== by 0xE277D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613953== by 0xCF6ED38: PetscInitialize (pinit.c:924) ==613953== by 0xCDE3FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==613953== by 0xCDE401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==613953== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==613953== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==613953== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==613953== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==613953== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==613953== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==613953== ==613953== Open file descriptor 115: ==613953== ==613953== ==613953== Open file descriptor 111: ==613953== ==613953== ==613953== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==613953== ==613953== ==613953== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==613953== ==613953== ==613953== ==613953== HEAP SUMMARY: ==613953== in use at exit: 700,722 bytes in 9,377 blocks ==613953== total heap usage: 64,965 allocs, 55,588 frees, 1,354,996,782 bytes allocated ==613953== ==613953== LEAK SUMMARY: ==613953== definitely lost: 0 bytes in 0 blocks ==613953== indirectly lost: 0 bytes in 0 blocks ==613953== possibly lost: 0 bytes in 0 blocks ==613953== still reachable: 24 bytes in 2 blocks ==613953== suppressed: 700,698 bytes in 9,375 blocks ==613953== Reachable blocks (those to which a pointer was found) are not shown. ==613953== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==613953== ==613953== For lists of detected and suppressed errors, rerun with: -s ==613953== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)