==629613== Memcheck, a memory error detector ==629613== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==629613== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==629613== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==629613== Parent PID: 612413 ==629613== ==629613== ==629613== FILE DESCRIPTORS: 9 open (3 std) at exit. ==629613== Open file descriptor 12: ==629613== at 0x856A22D: pipe (pipe.c:29) ==629613== by 0x13F8207D: ??? ==629613== by 0xEA7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==629613== by 0x9C64418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==629613== by 0x9BFDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==629613== by 0x88F4D38: PetscInitialize (pinit.c:924) ==629613== by 0x819BFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==629613== by 0x819C01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==629613== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==629613== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==629613== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==629613== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==629613== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==629613== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==629613== ==629613== Open file descriptor 8: /dev/shm/open_mpi.0000 ==629613== at 0x856EBCC: __open_nocancel (open64_nocancel.c:39) ==629613== by 0x84F2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==629613== by 0x81D0822: ??? ==629613== by 0x81D096F: ??? ==629613== by 0xEB206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==629613== by 0xEB20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==629613== by 0xEAD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==629613== by 0xEA7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==629613== by 0x9C64418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==629613== by 0x9BFDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==629613== by 0x88F4D38: PetscInitialize (pinit.c:924) ==629613== by 0x819BFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==629613== by 0x819C01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==629613== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==629613== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==629613== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==629613== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==629613== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==629613== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==629613== ==629613== Open file descriptor 115: ==629613== ==629613== ==629613== Open file descriptor 111: ==629613== ==629613== ==629613== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==629613== ==629613== ==629613== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==629613== ==629613== ==629613== ==629613== HEAP SUMMARY: ==629613== in use at exit: 700,738 bytes in 9,377 blocks ==629613== total heap usage: 51,129 allocs, 41,752 frees, 1,353,603,442 bytes allocated ==629613== ==629613== LEAK SUMMARY: ==629613== definitely lost: 0 bytes in 0 blocks ==629613== indirectly lost: 0 bytes in 0 blocks ==629613== possibly lost: 0 bytes in 0 blocks ==629613== still reachable: 24 bytes in 2 blocks ==629613== suppressed: 700,714 bytes in 9,375 blocks ==629613== Reachable blocks (those to which a pointer was found) are not shown. ==629613== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==629613== ==629613== For lists of detected and suppressed errors, rerun with: -s ==629613== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)