==614112== Memcheck, a memory error detector ==614112== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==614112== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==614112== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==614112== Parent PID: 612413 ==614112== ==614112== ==614112== FILE DESCRIPTORS: 9 open (3 std) at exit. ==614112== Open file descriptor 12: ==614112== at 0xEC2422D: pipe (pipe.c:29) ==614112== by 0x18A0707D: ??? ==614112== by 0x1400C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==614112== by 0x107F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614112== by 0x10789D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614112== by 0xF47ED38: PetscInitialize (pinit.c:924) ==614112== by 0xE4E8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==614112== by 0xE4E901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==614112== by 0x2E28FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==614112== by 0x2D9189: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==614112== by 0x2DD9E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==614112== by 0x2DD886: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==614112== by 0x2DDF1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==614112== by 0x2D7475: main (TestNodeBasedCellPopulation.cpp:19) ==614112== ==614112== Open file descriptor 8: /dev/shm/open_mpi.0000 ==614112== at 0xEC28BCC: __open_nocancel (open64_nocancel.c:39) ==614112== by 0xEBACC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==614112== by 0xE51D822: ??? ==614112== by 0xE51D96F: ??? ==614112== by 0x140B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614112== by 0x140B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614112== by 0x14067922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614112== by 0x1400C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==614112== by 0x107F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614112== by 0x10789D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614112== by 0xF47ED38: PetscInitialize (pinit.c:924) ==614112== by 0xE4E8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==614112== by 0xE4E901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==614112== by 0x2E28FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==614112== by 0x2D9189: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==614112== by 0x2DD9E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==614112== by 0x2DD886: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==614112== by 0x2DDF1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==614112== by 0x2D7475: main (TestNodeBasedCellPopulation.cpp:19) ==614112== ==614112== Open file descriptor 115: ==614112== ==614112== ==614112== Open file descriptor 111: ==614112== ==614112== ==614112== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==614112== ==614112== ==614112== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==614112== ==614112== ==614112== ==614112== HEAP SUMMARY: ==614112== in use at exit: 700,686 bytes in 9,374 blocks ==614112== total heap usage: 20,194,303 allocs, 20,184,929 frees, 2,578,015,832 bytes allocated ==614112== ==614112== LEAK SUMMARY: ==614112== definitely lost: 0 bytes in 0 blocks ==614112== indirectly lost: 0 bytes in 0 blocks ==614112== possibly lost: 0 bytes in 0 blocks ==614112== still reachable: 56 bytes in 3 blocks ==614112== suppressed: 700,630 bytes in 9,371 blocks ==614112== Reachable blocks (those to which a pointer was found) are not shown. ==614112== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==614112== ==614112== For lists of detected and suppressed errors, rerun with: -s ==614112== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)