==627987== Memcheck, a memory error detector ==627987== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==627987== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==627987== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==627987== Parent PID: 612413 ==627987== ==627987== ==627987== FILE DESCRIPTORS: 9 open (3 std) at exit. ==627987== Open file descriptor 12: ==627987== at 0x1029422D: pipe (pipe.c:29) ==627987== by 0x1A6C907D: ??? ==627987== by 0x1486A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==627987== by 0xFB9E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==627987== by 0xFB37D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==627987== by 0xE82ED38: PetscInitialize (pinit.c:924) ==627987== by 0xE6A3FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==627987== by 0xE6A401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==627987== by 0x193413: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==627987== by 0x18B14B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==627987== by 0x18E748: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==627987== by 0x18E5E8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==627987== by 0x18EC7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==627987== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==627987== ==627987== Open file descriptor 8: /dev/shm/open_mpi.0000 ==627987== at 0x10298BCC: __open_nocancel (open64_nocancel.c:39) ==627987== by 0x1021CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==627987== by 0xE6D8822: ??? ==627987== by 0xE6D896F: ??? ==627987== by 0x1490F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==627987== by 0x1490F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==627987== by 0x148C5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==627987== by 0x1486A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==627987== by 0xFB9E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==627987== by 0xFB37D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==627987== by 0xE82ED38: PetscInitialize (pinit.c:924) ==627987== by 0xE6A3FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==627987== by 0xE6A401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==627987== by 0x193413: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==627987== by 0x18B14B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==627987== by 0x18E748: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==627987== by 0x18E5E8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==627987== by 0x18EC7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==627987== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==627987== ==627987== Open file descriptor 115: ==627987== ==627987== ==627987== Open file descriptor 111: ==627987== ==627987== ==627987== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==627987== ==627987== ==627987== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==627987== ==627987== ==627987== ==627987== HEAP SUMMARY: ==627987== in use at exit: 700,834 bytes in 9,379 blocks ==627987== total heap usage: 863,762 allocs, 854,383 frees, 1,475,949,274 bytes allocated ==627987== ==627987== LEAK SUMMARY: ==627987== definitely lost: 0 bytes in 0 blocks ==627987== indirectly lost: 0 bytes in 0 blocks ==627987== possibly lost: 0 bytes in 0 blocks ==627987== still reachable: 120 bytes in 4 blocks ==627987== suppressed: 700,714 bytes in 9,375 blocks ==627987== Reachable blocks (those to which a pointer was found) are not shown. ==627987== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==627987== ==627987== For lists of detected and suppressed errors, rerun with: -s ==627987== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)