==614581== Memcheck, a memory error detector ==614581== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==614581== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==614581== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==614581== Parent PID: 612413 ==614581== ==614581== ==614581== FILE DESCRIPTORS: 9 open (3 std) at exit. ==614581== Open file descriptor 12: ==614581== at 0xEC3822D: pipe (pipe.c:29) ==614581== by 0x18A0707D: ??? ==614581== by 0x1400C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==614581== by 0x108D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614581== by 0x10870D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614581== by 0xF567D38: PetscInitialize (pinit.c:924) ==614581== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==614581== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==614581== by 0x13285A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==614581== by 0x12D813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==614581== by 0x12FFCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==614581== by 0x12FEC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==614581== by 0x1304DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==614581== by 0x12C015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==614581== ==614581== Open file descriptor 8: /dev/shm/open_mpi.0000 ==614581== at 0xEC3CBCC: __open_nocancel (open64_nocancel.c:39) ==614581== by 0xEBC0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==614581== by 0xE48E822: ??? ==614581== by 0xE48E96F: ??? ==614581== by 0x140B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614581== by 0x140B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614581== by 0x14067922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614581== by 0x1400C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==614581== by 0x108D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614581== by 0x10870D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614581== by 0xF567D38: PetscInitialize (pinit.c:924) ==614581== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==614581== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==614581== by 0x13285A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==614581== by 0x12D813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==614581== by 0x12FFCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==614581== by 0x12FEC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==614581== by 0x1304DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==614581== by 0x12C015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==614581== ==614581== Open file descriptor 115: ==614581== ==614581== ==614581== Open file descriptor 111: ==614581== ==614581== ==614581== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==614581== ==614581== ==614581== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==614581== ==614581== ==614581== ==614581== HEAP SUMMARY: ==614581== in use at exit: 700,686 bytes in 9,374 blocks ==614581== total heap usage: 6,678,129 allocs, 6,668,755 frees, 9,011,159,613 bytes allocated ==614581== ==614581== LEAK SUMMARY: ==614581== definitely lost: 0 bytes in 0 blocks ==614581== indirectly lost: 0 bytes in 0 blocks ==614581== possibly lost: 0 bytes in 0 blocks ==614581== still reachable: 56 bytes in 3 blocks ==614581== suppressed: 700,630 bytes in 9,371 blocks ==614581== Reachable blocks (those to which a pointer was found) are not shown. ==614581== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==614581== ==614581== For lists of detected and suppressed errors, rerun with: -s ==614581== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)