==614571== Memcheck, a memory error detector ==614571== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==614571== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==614571== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==614571== Parent PID: 612413 ==614571== ==614571== ==614571== FILE DESCRIPTORS: 9 open (3 std) at exit. ==614571== Open file descriptor 12: ==614571== at 0xEC7C22D: pipe (pipe.c:29) ==614571== by 0x18A0707D: ??? ==614571== by 0x1400C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==614571== by 0x108D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614571== by 0x10870D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614571== by 0xF567D38: PetscInitialize (pinit.c:924) ==614571== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==614571== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==614571== by 0x2129C6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==614571== by 0x209F69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==614571== by 0x20DBB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==614571== by 0x20DA58: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==614571== by 0x20E0EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==614571== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==614571== ==614571== Open file descriptor 8: /dev/shm/open_mpi.0000 ==614571== at 0xEC80BCC: __open_nocancel (open64_nocancel.c:39) ==614571== by 0xEC04C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==614571== by 0xE48E822: ??? ==614571== by 0xE48E96F: ??? ==614571== by 0x140B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614571== by 0x140B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614571== by 0x14067922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614571== by 0x1400C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==614571== by 0x108D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614571== by 0x10870D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614571== by 0xF567D38: PetscInitialize (pinit.c:924) ==614571== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==614571== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==614571== by 0x2129C6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==614571== by 0x209F69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==614571== by 0x20DBB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==614571== by 0x20DA58: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==614571== by 0x20E0EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==614571== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==614571== ==614571== Open file descriptor 115: ==614571== ==614571== ==614571== Open file descriptor 111: ==614571== ==614571== ==614571== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==614571== ==614571== ==614571== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==614571== ==614571== ==614571== ==614571== HEAP SUMMARY: ==614571== in use at exit: 700,718 bytes in 9,375 blocks ==614571== total heap usage: 17,974,418 allocs, 17,965,043 frees, 30,089,549,302 bytes allocated ==614571== ==614571== LEAK SUMMARY: ==614571== definitely lost: 0 bytes in 0 blocks ==614571== indirectly lost: 0 bytes in 0 blocks ==614571== possibly lost: 0 bytes in 0 blocks ==614571== still reachable: 88 bytes in 4 blocks ==614571== suppressed: 700,630 bytes in 9,371 blocks ==614571== Reachable blocks (those to which a pointer was found) are not shown. ==614571== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==614571== ==614571== For lists of detected and suppressed errors, rerun with: -s ==614571== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)