==614926== Memcheck, a memory error detector ==614926== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==614926== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==614926== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==614926== Parent PID: 612413 ==614926== ==614926== ==614926== FILE DESCRIPTORS: 9 open (3 std) at exit. ==614926== Open file descriptor 12: ==614926== at 0xF0F822D: pipe (pipe.c:29) ==614926== by 0x18A0707D: ??? ==614926== by 0x141304CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==614926== by 0x10D53418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614926== by 0x10CECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614926== by 0xF9E3D38: PetscInitialize (pinit.c:924) ==614926== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==614926== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==614926== by 0x1D25D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==614926== by 0x1CBF69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==614926== by 0x1CF704: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==614926== by 0x1CF5A4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==614926== by 0x1CFC3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==614926== by 0x1CA255: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==614926== ==614926== Open file descriptor 8: /dev/shm/open_mpi.0000 ==614926== at 0xF0FCBCC: __open_nocancel (open64_nocancel.c:39) ==614926== by 0xF080C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==614926== by 0xE48E822: ??? ==614926== by 0xE48E96F: ??? ==614926== by 0x141D56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614926== by 0x141D5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614926== by 0x1418B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==614926== by 0x141302DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==614926== by 0x10D53418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614926== by 0x10CECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==614926== by 0xF9E3D38: PetscInitialize (pinit.c:924) ==614926== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==614926== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==614926== by 0x1D25D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==614926== by 0x1CBF69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==614926== by 0x1CF704: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==614926== by 0x1CF5A4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==614926== by 0x1CFC3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==614926== by 0x1CA255: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==614926== ==614926== Open file descriptor 115: ==614926== ==614926== ==614926== Open file descriptor 111: ==614926== ==614926== ==614926== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==614926== ==614926== ==614926== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==614926== ==614926== ==614926== ==614926== HEAP SUMMARY: ==614926== in use at exit: 700,686 bytes in 9,374 blocks ==614926== total heap usage: 7,097,293 allocs, 7,087,919 frees, 8,099,003,786 bytes allocated ==614926== ==614926== LEAK SUMMARY: ==614926== definitely lost: 0 bytes in 0 blocks ==614926== indirectly lost: 0 bytes in 0 blocks ==614926== possibly lost: 0 bytes in 0 blocks ==614926== still reachable: 56 bytes in 3 blocks ==614926== suppressed: 700,630 bytes in 9,371 blocks ==614926== Reachable blocks (those to which a pointer was found) are not shown. ==614926== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==614926== ==614926== For lists of detected and suppressed errors, rerun with: -s ==614926== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)