==627849== Memcheck, a memory error detector ==627849== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==627849== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==627849== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningNodeBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==627849== Parent PID: 612413 ==627849== ==627849== ==627849== FILE DESCRIPTORS: 9 open (3 std) at exit. ==627849== Open file descriptor 12: ==627849== at 0xEC3822D: pipe (pipe.c:29) ==627849== by 0x18A0707D: ??? ==627849== by 0x1400C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==627849== by 0x108D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==627849== by 0x10870D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==627849== by 0xF567D38: PetscInitialize (pinit.c:924) ==627849== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==627849== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==627849== by 0x12C790: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==627849== by 0x127D05: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==627849== by 0x12A3B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==627849== by 0x12A254: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==627849== by 0x12A8EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==627849== by 0x126035: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==627849== ==627849== Open file descriptor 8: /dev/shm/open_mpi.0000 ==627849== at 0xEC3CBCC: __open_nocancel (open64_nocancel.c:39) ==627849== by 0xEBC0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==627849== by 0xE48E822: ??? ==627849== by 0xE48E96F: ??? ==627849== by 0x140B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==627849== by 0x140B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==627849== by 0x14067922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==627849== by 0x1400C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==627849== by 0x108D7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==627849== by 0x10870D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==627849== by 0xF567D38: PetscInitialize (pinit.c:924) ==627849== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==627849== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==627849== by 0x12C790: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==627849== by 0x127D05: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==627849== by 0x12A3B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==627849== by 0x12A254: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==627849== by 0x12A8EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==627849== by 0x126035: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==627849== ==627849== Open file descriptor 115: ==627849== ==627849== ==627849== Open file descriptor 111: ==627849== ==627849== ==627849== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningNodeBasedSimulationsTutorial_valgrind.txt ==627849== ==627849== ==627849== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==627849== ==627849== ==627849== ==627849== HEAP SUMMARY: ==627849== in use at exit: 700,754 bytes in 9,378 blocks ==627849== total heap usage: 674,103 allocs, 664,725 frees, 1,740,565,258 bytes allocated ==627849== ==627849== LEAK SUMMARY: ==627849== definitely lost: 0 bytes in 0 blocks ==627849== indirectly lost: 0 bytes in 0 blocks ==627849== possibly lost: 0 bytes in 0 blocks ==627849== still reachable: 56 bytes in 3 blocks ==627849== suppressed: 700,698 bytes in 9,375 blocks ==627849== Reachable blocks (those to which a pointer was found) are not shown. ==627849== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==627849== ==627849== For lists of detected and suppressed errors, rerun with: -s ==627849== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)