==613730== Memcheck, a memory error detector ==613730== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==613730== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==613730== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==613730== Parent PID: 612413 ==613730== ==613730== ==613730== FILE DESCRIPTORS: 9 open (3 std) at exit. ==613730== Open file descriptor 12: ==613730== at 0x103A422D: pipe (pipe.c:29) ==613730== by 0x18A0707D: ??? ==613730== by 0x13F6E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==613730== by 0xFCAE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613730== by 0xFC47D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613730== by 0xE91ED38: PetscInitialize (pinit.c:924) ==613730== by 0xE7F5FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==613730== by 0xE7F601D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==613730== by 0x1284B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==613730== by 0x123A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==613730== by 0x125FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==613730== by 0x125EA5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==613730== by 0x1264B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==613730== by 0x122235: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==613730== ==613730== Open file descriptor 8: /dev/shm/open_mpi.0000 ==613730== at 0x103A8BCC: __open_nocancel (open64_nocancel.c:39) ==613730== by 0x1032CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==613730== by 0xFBA8822: ??? ==613730== by 0xFBA896F: ??? ==613730== by 0x140136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==613730== by 0x14013938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==613730== by 0x13FC9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==613730== by 0x13F6E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==613730== by 0xFCAE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613730== by 0xFC47D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==613730== by 0xE91ED38: PetscInitialize (pinit.c:924) ==613730== by 0xE7F5FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==613730== by 0xE7F601D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==613730== by 0x1284B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==613730== by 0x123A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==613730== by 0x125FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==613730== by 0x125EA5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==613730== by 0x1264B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==613730== by 0x122235: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==613730== ==613730== Open file descriptor 115: ==613730== ==613730== ==613730== Open file descriptor 111: ==613730== ==613730== ==613730== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==613730== ==613730== ==613730== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==613730== ==613730== ==613730== ==613730== HEAP SUMMARY: ==613730== in use at exit: 700,686 bytes in 9,374 blocks ==613730== total heap usage: 7,737,707 allocs, 7,728,333 frees, 2,198,475,038 bytes allocated ==613730== ==613730== LEAK SUMMARY: ==613730== definitely lost: 0 bytes in 0 blocks ==613730== indirectly lost: 0 bytes in 0 blocks ==613730== possibly lost: 0 bytes in 0 blocks ==613730== still reachable: 56 bytes in 3 blocks ==613730== suppressed: 700,630 bytes in 9,371 blocks ==613730== Reachable blocks (those to which a pointer was found) are not shown. ==613730== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==613730== ==613730== For lists of detected and suppressed errors, rerun with: -s ==613730== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)