==628076== Memcheck, a memory error detector ==628076== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==628076== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==628076== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==628076== Parent PID: 612413 ==628076== ==628076== ==628076== FILE DESCRIPTORS: 9 open (3 std) at exit. ==628076== Open file descriptor 12: ==628076== at 0x11B4D22D: pipe (pipe.c:29) ==628076== by 0x1A6C807D: ??? ==628076== by 0x1587D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==628076== by 0x11459418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628076== by 0x113F2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628076== by 0x100E7D38: PetscInitialize (pinit.c:924) ==628076== by 0xFF5CFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==628076== by 0xFF5D01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==628076== by 0x135B81: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==628076== by 0x130475: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==628076== by 0x133224: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==628076== by 0x1330C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==628076== by 0x13375B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==628076== by 0x12E7A5: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==628076== ==628076== Open file descriptor 8: /dev/shm/open_mpi.0000 ==628076== at 0x11B51BCC: __open_nocancel (open64_nocancel.c:39) ==628076== by 0x11AD5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==628076== by 0xFF91822: ??? ==628076== by 0xFF9196F: ??? ==628076== by 0x159226DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==628076== by 0x15922938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==628076== by 0x158D8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==628076== by 0x1587D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==628076== by 0x11459418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628076== by 0x113F2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==628076== by 0x100E7D38: PetscInitialize (pinit.c:924) ==628076== by 0xFF5CFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==628076== by 0xFF5D01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==628076== by 0x135B81: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==628076== by 0x130475: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==628076== by 0x133224: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==628076== by 0x1330C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==628076== by 0x13375B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==628076== by 0x12E7A5: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==628076== ==628076== Open file descriptor 115: ==628076== ==628076== ==628076== Open file descriptor 111: ==628076== ==628076== ==628076== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==628076== ==628076== ==628076== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==628076== ==628076== ==628076== ==628076== HEAP SUMMARY: ==628076== in use at exit: 700,738 bytes in 9,377 blocks ==628076== total heap usage: 521,201 allocs, 511,824 frees, 1,562,159,128 bytes allocated ==628076== ==628076== LEAK SUMMARY: ==628076== definitely lost: 0 bytes in 0 blocks ==628076== indirectly lost: 0 bytes in 0 blocks ==628076== possibly lost: 0 bytes in 0 blocks ==628076== still reachable: 24 bytes in 2 blocks ==628076== suppressed: 700,714 bytes in 9,375 blocks ==628076== Reachable blocks (those to which a pointer was found) are not shown. ==628076== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==628076== ==628076== For lists of detected and suppressed errors, rerun with: -s ==628076== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)