==670288== Memcheck, a memory error detector ==670288== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==670288== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==670288== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==670288== Parent PID: 668451 ==670288== ==670288== ==670288== FILE DESCRIPTORS: 9 open (3 std) at exit. ==670288== Open file descriptor 12: ==670288== at 0xEB5122D: pipe (pipe.c:29) ==670288== by 0x18A0707D: ??? ==670288== by 0x1400C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==670288== by 0x107F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==670288== by 0x10789D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==670288== by 0xF480D38: PetscInitialize (pinit.c:924) ==670288== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==670288== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==670288== by 0x1222F6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==670288== by 0x11DA65: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==670288== by 0x11FE54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==670288== by 0x11FCF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==670288== by 0x12038B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==670288== by 0x11BD95: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==670288== ==670288== Open file descriptor 8: /dev/shm/open_mpi.0000 ==670288== at 0xEB55BCC: __open_nocancel (open64_nocancel.c:39) ==670288== by 0xEAD9C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==670288== by 0xE48E822: ??? ==670288== by 0xE48E96F: ??? ==670288== by 0x140B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==670288== by 0x140B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==670288== by 0x14067922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==670288== by 0x1400C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==670288== by 0x107F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==670288== by 0x10789D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==670288== by 0xF480D38: PetscInitialize (pinit.c:924) ==670288== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==670288== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==670288== by 0x1222F6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==670288== by 0x11DA65: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==670288== by 0x11FE54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==670288== by 0x11FCF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==670288== by 0x12038B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==670288== by 0x11BD95: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==670288== ==670288== Open file descriptor 115: ==670288== ==670288== ==670288== Open file descriptor 111: ==670288== ==670288== ==670288== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==670288== ==670288== ==670288== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==670288== ==670288== ==670288== ==670288== HEAP SUMMARY: ==670288== in use at exit: 700,754 bytes in 9,378 blocks ==670288== total heap usage: 1,126,598 allocs, 1,117,220 frees, 1,431,032,261 bytes allocated ==670288== ==670288== LEAK SUMMARY: ==670288== definitely lost: 0 bytes in 0 blocks ==670288== indirectly lost: 0 bytes in 0 blocks ==670288== possibly lost: 0 bytes in 0 blocks ==670288== still reachable: 56 bytes in 3 blocks ==670288== suppressed: 700,698 bytes in 9,375 blocks ==670288== Reachable blocks (those to which a pointer was found) are not shown. ==670288== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==670288== ==670288== For lists of detected and suppressed errors, rerun with: -s ==670288== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)