==670034== Memcheck, a memory error detector ==670034== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==670034== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==670034== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==670034== Parent PID: 668451 ==670034== ==670034== ==670034== FILE DESCRIPTORS: 9 open (3 std) at exit. ==670034== Open file descriptor 12: ==670034== at 0xD2DA22D: pipe (pipe.c:29) ==670034== by 0x18A0607D: ??? ==670034== by 0x140164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==670034== by 0x107F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==670034== by 0x10789D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==670034== by 0xF480D38: PetscInitialize (pinit.c:924) ==670034== by 0xCB9EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==670034== by 0xCB9F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==670034== by 0x132B76: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==670034== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==670034== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==670034== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==670034== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==670034== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==670034== ==670034== Open file descriptor 8: /dev/shm/open_mpi.0000 ==670034== at 0xD2DEBCC: __open_nocancel (open64_nocancel.c:39) ==670034== by 0xD262C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==670034== by 0xCBD3822: ??? ==670034== by 0xCBD396F: ??? ==670034== by 0x140BB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==670034== by 0x140BB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==670034== by 0x14071922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==670034== by 0x140162DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==670034== by 0x107F0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==670034== by 0x10789D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==670034== by 0xF480D38: PetscInitialize (pinit.c:924) ==670034== by 0xCB9EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==670034== by 0xCB9F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==670034== by 0x132B76: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==670034== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==670034== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==670034== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==670034== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==670034== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==670034== ==670034== Open file descriptor 115: ==670034== ==670034== ==670034== Open file descriptor 111: ==670034== ==670034== ==670034== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==670034== ==670034== ==670034== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==670034== ==670034== ==670034== ==670034== HEAP SUMMARY: ==670034== in use at exit: 700,754 bytes in 9,378 blocks ==670034== total heap usage: 57,483 allocs, 48,105 frees, 1,354,219,763 bytes allocated ==670034== ==670034== LEAK SUMMARY: ==670034== definitely lost: 0 bytes in 0 blocks ==670034== indirectly lost: 0 bytes in 0 blocks ==670034== possibly lost: 0 bytes in 0 blocks ==670034== still reachable: 56 bytes in 3 blocks ==670034== suppressed: 700,698 bytes in 9,375 blocks ==670034== Reachable blocks (those to which a pointer was found) are not shown. ==670034== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==670034== ==670034== For lists of detected and suppressed errors, rerun with: -s ==670034== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)