==669593== Memcheck, a memory error detector ==669593== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==669593== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==669593== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==669593== Parent PID: 668451 ==669593== ==669593== ==669593== FILE DESCRIPTORS: 9 open (3 std) at exit. ==669593== Open file descriptor 12: ==669593== at 0xE40822D: pipe (pipe.c:29) ==669593== by 0x18A0807D: ??? ==669593== by 0x12F574CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==669593== by 0xE059418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==669593== by 0xDFF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==669593== by 0xCCC9D38: PetscInitialize (pinit.c:924) ==669593== by 0xCB9EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==669593== by 0xCB9F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==669593== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==669593== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==669593== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==669593== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==669593== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==669593== by 0x113935: main (TestCellSrn.cpp:18) ==669593== ==669593== Open file descriptor 8: /dev/shm/open_mpi.0000 ==669593== at 0xE40CBCC: __open_nocancel (open64_nocancel.c:39) ==669593== by 0xE390C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==669593== by 0xDF53822: ??? ==669593== by 0xDF5396F: ??? ==669593== by 0x12FFC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==669593== by 0x12FFC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==669593== by 0x12FB2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==669593== by 0x12F572DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==669593== by 0xE059418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==669593== by 0xDFF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==669593== by 0xCCC9D38: PetscInitialize (pinit.c:924) ==669593== by 0xCB9EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==669593== by 0xCB9F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==669593== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==669593== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==669593== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==669593== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==669593== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==669593== by 0x113935: main (TestCellSrn.cpp:18) ==669593== ==669593== Open file descriptor 115: ==669593== ==669593== ==669593== Open file descriptor 111: ==669593== ==669593== ==669593== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==669593== ==669593== ==669593== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==669593== ==669593== ==669593== ==669593== HEAP SUMMARY: ==669593== in use at exit: 700,818 bytes in 9,379 blocks ==669593== total heap usage: 65,096 allocs, 55,717 frees, 1,354,424,559 bytes allocated ==669593== ==669593== LEAK SUMMARY: ==669593== definitely lost: 0 bytes in 0 blocks ==669593== indirectly lost: 0 bytes in 0 blocks ==669593== possibly lost: 0 bytes in 0 blocks ==669593== still reachable: 120 bytes in 4 blocks ==669593== suppressed: 700,698 bytes in 9,375 blocks ==669593== Reachable blocks (those to which a pointer was found) are not shown. ==669593== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==669593== ==669593== For lists of detected and suppressed errors, rerun with: -s ==669593== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)