==684544== Memcheck, a memory error detector ==684544== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==684544== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==684544== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==684544== Parent PID: 668451 ==684544== ==684544== ==684544== FILE DESCRIPTORS: 9 open (3 std) at exit. ==684544== Open file descriptor 12: ==684544== at 0x118C822D: pipe (pipe.c:29) ==684544== by 0x1A6C707D: ??? ==684544== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==684544== by 0x111D2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==684544== by 0x1116BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==684544== by 0xFE42D38: PetscInitialize (pinit.c:924) ==684544== by 0xFD19FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==684544== by 0xFD1A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==684544== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==684544== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==684544== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==684544== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==684544== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==684544== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==684544== ==684544== Open file descriptor 8: /dev/shm/open_mpi.0000 ==684544== at 0x118CCBCC: __open_nocancel (open64_nocancel.c:39) ==684544== by 0x11850C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==684544== by 0x110CC822: ??? ==684544== by 0x110CC96F: ??? ==684544== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==684544== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==684544== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==684544== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==684544== by 0x111D2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==684544== by 0x1116BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==684544== by 0xFE42D38: PetscInitialize (pinit.c:924) ==684544== by 0xFD19FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==684544== by 0xFD1A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==684544== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==684544== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==684544== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==684544== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==684544== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==684544== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==684544== ==684544== Open file descriptor 115: ==684544== ==684544== ==684544== Open file descriptor 111: ==684544== ==684544== ==684544== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==684544== ==684544== ==684544== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==684544== ==684544== ==684544== ==684544== HEAP SUMMARY: ==684544== in use at exit: 700,770 bytes in 9,378 blocks ==684544== total heap usage: 1,755,591 allocs, 1,746,213 frees, 1,530,073,351 bytes allocated ==684544== ==684544== LEAK SUMMARY: ==684544== definitely lost: 0 bytes in 0 blocks ==684544== indirectly lost: 0 bytes in 0 blocks ==684544== possibly lost: 0 bytes in 0 blocks ==684544== still reachable: 56 bytes in 3 blocks ==684544== suppressed: 700,714 bytes in 9,375 blocks ==684544== Reachable blocks (those to which a pointer was found) are not shown. ==684544== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==684544== ==684544== For lists of detected and suppressed errors, rerun with: -s ==684544== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)