==683904== Memcheck, a memory error detector ==683904== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==683904== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==683904== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==683904== Parent PID: 668451 ==683904== ==683904== ==683904== FILE DESCRIPTORS: 9 open (3 std) at exit. ==683904== Open file descriptor 12: ==683904== at 0x1000822D: pipe (pipe.c:29) ==683904== by 0x18A0707D: ??? ==683904== by 0x13F6A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==683904== by 0xF912418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==683904== by 0xF8ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==683904== by 0xE582D38: PetscInitialize (pinit.c:924) ==683904== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==683904== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==683904== by 0x1213C1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==683904== by 0x11C9A5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==683904== by 0x11EF94: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==683904== by 0x11EE34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==683904== by 0x11F4CB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==683904== by 0x11ACD5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==683904== ==683904== Open file descriptor 8: /dev/shm/open_mpi.0000 ==683904== at 0x1000CBCC: __open_nocancel (open64_nocancel.c:39) ==683904== by 0xFF90C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==683904== by 0xF80C822: ??? ==683904== by 0xF80C96F: ??? ==683904== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==683904== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==683904== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==683904== by 0x13F6A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==683904== by 0xF912418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==683904== by 0xF8ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==683904== by 0xE582D38: PetscInitialize (pinit.c:924) ==683904== by 0xE459FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==683904== by 0xE45A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==683904== by 0x1213C1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==683904== by 0x11C9A5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==683904== by 0x11EF94: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==683904== by 0x11EE34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==683904== by 0x11F4CB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==683904== by 0x11ACD5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==683904== ==683904== Open file descriptor 115: ==683904== ==683904== ==683904== Open file descriptor 111: ==683904== ==683904== ==683904== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==683904== ==683904== ==683904== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==683904== ==683904== ==683904== ==683904== HEAP SUMMARY: ==683904== in use at exit: 700,754 bytes in 9,378 blocks ==683904== total heap usage: 3,339,546 allocs, 3,330,168 frees, 2,282,271,228 bytes allocated ==683904== ==683904== LEAK SUMMARY: ==683904== definitely lost: 0 bytes in 0 blocks ==683904== indirectly lost: 0 bytes in 0 blocks ==683904== possibly lost: 0 bytes in 0 blocks ==683904== still reachable: 56 bytes in 3 blocks ==683904== suppressed: 700,698 bytes in 9,375 blocks ==683904== Reachable blocks (those to which a pointer was found) are not shown. ==683904== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==683904== ==683904== For lists of detected and suppressed errors, rerun with: -s ==683904== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)