==756596== Memcheck, a memory error detector ==756596== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==756596== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==756596== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==756596== Parent PID: 740827 ==756596== ==756596== ==756596== FILE DESCRIPTORS: 9 open (3 std) at exit. ==756596== Open file descriptor 12: ==756596== at 0x1190922D: pipe (pipe.c:29) ==756596== by 0x1A6C707D: ??? ==756596== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==756596== by 0x11213418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==756596== by 0x111ACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==756596== by 0xFEA3D38: PetscInitialize (pinit.c:924) ==756596== by 0xFD18FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==756596== by 0xFD1901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==756596== by 0x2247F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==756596== by 0x21BFC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==756596== by 0x21FBD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==756596== by 0x21FA70: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==756596== by 0x220107: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==756596== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==756596== ==756596== Open file descriptor 8: /dev/shm/open_mpi.0000 ==756596== at 0x1190DBCC: __open_nocancel (open64_nocancel.c:39) ==756596== by 0x11891C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==756596== by 0xFD4D822: ??? ==756596== by 0xFD4D96F: ??? ==756596== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==756596== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==756596== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==756596== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==756596== by 0x11213418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==756596== by 0x111ACD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==756596== by 0xFEA3D38: PetscInitialize (pinit.c:924) ==756596== by 0xFD18FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==756596== by 0xFD1901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==756596== by 0x2247F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==756596== by 0x21BFC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==756596== by 0x21FBD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==756596== by 0x21FA70: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==756596== by 0x220107: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==756596== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==756596== ==756596== Open file descriptor 116: ==756596== ==756596== ==756596== Open file descriptor 112: ==756596== ==756596== ==756596== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==756596== ==756596== ==756596== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==756596== ==756596== ==756596== ==756596== HEAP SUMMARY: ==756596== in use at exit: 700,702 bytes in 9,374 blocks ==756596== total heap usage: 3,719,987 allocs, 3,710,613 frees, 1,636,714,689 bytes allocated ==756596== ==756596== LEAK SUMMARY: ==756596== definitely lost: 0 bytes in 0 blocks ==756596== indirectly lost: 0 bytes in 0 blocks ==756596== possibly lost: 0 bytes in 0 blocks ==756596== still reachable: 56 bytes in 3 blocks ==756596== suppressed: 700,646 bytes in 9,371 blocks ==756596== Reachable blocks (those to which a pointer was found) are not shown. ==756596== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==756596== ==756596== For lists of detected and suppressed errors, rerun with: -s ==756596== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)