==742373== Memcheck, a memory error detector ==742373== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==742373== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==742373== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestTysonNovak2001OdeSystem -malloc_debug -malloc_dump -memory_info ==742373== Parent PID: 740827 ==742373== ==742373== ==742373== FILE DESCRIPTORS: 9 open (3 std) at exit. ==742373== Open file descriptor 12: ==742373== at 0xD24B22D: pipe (pipe.c:29) ==742373== by 0x18A0607D: ??? ==742373== by 0x13FC94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==742373== by 0x104A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==742373== by 0x10441D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==742373== by 0xF138D38: PetscInitialize (pinit.c:924) ==742373== by 0xCE56FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==742373== by 0xCE5701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==742373== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==742373== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==742373== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==742373== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==742373== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==742373== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==742373== ==742373== Open file descriptor 8: /dev/shm/open_mpi.0000 ==742373== at 0xD24FBCC: __open_nocancel (open64_nocancel.c:39) ==742373== by 0xD1D3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==742373== by 0xCE8B822: ??? ==742373== by 0xCE8B96F: ??? ==742373== by 0x1406E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==742373== by 0x1406E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==742373== by 0x14024922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==742373== by 0x13FC92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==742373== by 0x104A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==742373== by 0x10441D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==742373== by 0xF138D38: PetscInitialize (pinit.c:924) ==742373== by 0xCE56FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==742373== by 0xCE5701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==742373== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==742373== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==742373== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==742373== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==742373== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==742373== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==742373== ==742373== Open file descriptor 116: ==742373== ==742373== ==742373== Open file descriptor 112: ==742373== ==742373== ==742373== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestTysonNovak2001OdeSystem_valgrind.txt ==742373== ==742373== ==742373== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==742373== ==742373== ==742373== ==742373== HEAP SUMMARY: ==742373== in use at exit: 700,722 bytes in 9,377 blocks ==742373== total heap usage: 60,166 allocs, 50,789 frees, 1,354,347,390 bytes allocated ==742373== ==742373== LEAK SUMMARY: ==742373== definitely lost: 0 bytes in 0 blocks ==742373== indirectly lost: 0 bytes in 0 blocks ==742373== possibly lost: 0 bytes in 0 blocks ==742373== still reachable: 24 bytes in 2 blocks ==742373== suppressed: 700,698 bytes in 9,375 blocks ==742373== Reachable blocks (those to which a pointer was found) are not shown. ==742373== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==742373== ==742373== For lists of detected and suppressed errors, rerun with: -s ==742373== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)