==813010== Memcheck, a memory error detector ==813010== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==813010== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==813010== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==813010== Parent PID: 796951 ==813010== ==813010== ==813010== FILE DESCRIPTORS: 9 open (3 std) at exit. ==813010== Open file descriptor 12: ==813010== at 0x118C722D: pipe (pipe.c:29) ==813010== by 0x1A6C707D: ??? ==813010== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==813010== by 0x111D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==813010== by 0x1116AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==813010== by 0xFE41D38: PetscInitialize (pinit.c:924) ==813010== by 0xFD18FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==813010== by 0xFD1901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==813010== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==813010== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==813010== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==813010== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==813010== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==813010== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==813010== ==813010== Open file descriptor 8: /dev/shm/open_mpi.0000 ==813010== at 0x118CBBCC: __open_nocancel (open64_nocancel.c:39) ==813010== by 0x1184FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==813010== by 0x110CB822: ??? ==813010== by 0x110CB96F: ??? ==813010== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==813010== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==813010== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==813010== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==813010== by 0x111D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==813010== by 0x1116AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==813010== by 0xFE41D38: PetscInitialize (pinit.c:924) ==813010== by 0xFD18FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==813010== by 0xFD1901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==813010== by 0x120DC7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==813010== by 0x11C653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==813010== by 0x11E8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==813010== by 0x11E7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==813010== by 0x11EDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==813010== by 0x11AE55: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==813010== ==813010== Open file descriptor 116: ==813010== ==813010== ==813010== Open file descriptor 112: ==813010== ==813010== ==813010== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==813010== ==813010== ==813010== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==813010== ==813010== ==813010== ==813010== HEAP SUMMARY: ==813010== in use at exit: 700,770 bytes in 9,378 blocks ==813010== total heap usage: 1,755,588 allocs, 1,746,210 frees, 1,530,073,297 bytes allocated ==813010== ==813010== LEAK SUMMARY: ==813010== definitely lost: 0 bytes in 0 blocks ==813010== indirectly lost: 0 bytes in 0 blocks ==813010== possibly lost: 0 bytes in 0 blocks ==813010== still reachable: 56 bytes in 3 blocks ==813010== suppressed: 700,714 bytes in 9,375 blocks ==813010== Reachable blocks (those to which a pointer was found) are not shown. ==813010== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==813010== ==813010== For lists of detected and suppressed errors, rerun with: -s ==813010== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)