==933299== Memcheck, a memory error detector ==933299== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==933299== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==933299== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==933299== Parent PID: 908152 ==933299== ==933299== ==933299== FILE DESCRIPTORS: 9 open (3 std) at exit. ==933299== Open file descriptor 12: ==933299== at 0xEC2322D: pipe (pipe.c:29) ==933299== by 0x18A0507D: ??? ==933299== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933299== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933299== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933299== by 0xF47DD38: PetscInitialize (pinit.c:924) ==933299== by 0xE4E7FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933299== by 0xE4E801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933299== by 0x2E28FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933299== by 0x2D9189: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933299== by 0x2DD9E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933299== by 0x2DD886: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933299== by 0x2DDF1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933299== by 0x2D7475: main (TestNodeBasedCellPopulation.cpp:19) ==933299== ==933299== Open file descriptor 8: /dev/shm/open_mpi.0000 ==933299== at 0xEC27BCC: __open_nocancel (open64_nocancel.c:39) ==933299== by 0xEBABC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==933299== by 0xE51C822: ??? ==933299== by 0xE51C96F: ??? ==933299== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933299== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933299== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933299== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933299== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933299== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933299== by 0xF47DD38: PetscInitialize (pinit.c:924) ==933299== by 0xE4E7FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933299== by 0xE4E801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933299== by 0x2E28FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933299== by 0x2D9189: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933299== by 0x2DD9E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933299== by 0x2DD886: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933299== by 0x2DDF1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933299== by 0x2D7475: main (TestNodeBasedCellPopulation.cpp:19) ==933299== ==933299== Open file descriptor 116: ==933299== ==933299== ==933299== Open file descriptor 112: ==933299== ==933299== ==933299== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==933299== ==933299== ==933299== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==933299== ==933299== ==933299== ==933299== HEAP SUMMARY: ==933299== in use at exit: 700,686 bytes in 9,374 blocks ==933299== total heap usage: 20,194,310 allocs, 20,184,936 frees, 2,578,016,115 bytes allocated ==933299== ==933299== LEAK SUMMARY: ==933299== definitely lost: 0 bytes in 0 blocks ==933299== indirectly lost: 0 bytes in 0 blocks ==933299== possibly lost: 0 bytes in 0 blocks ==933299== still reachable: 56 bytes in 3 blocks ==933299== suppressed: 700,630 bytes in 9,371 blocks ==933299== Reachable blocks (those to which a pointer was found) are not shown. ==933299== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==933299== ==933299== For lists of detected and suppressed errors, rerun with: -s ==933299== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)