==933871== Memcheck, a memory error detector ==933871== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==933871== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==933871== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==933871== Parent PID: 908152 ==933871== ==933871== ==933871== FILE DESCRIPTORS: 9 open (3 std) at exit. ==933871== Open file descriptor 12: ==933871== at 0xF01722D: pipe (pipe.c:29) ==933871== by 0x18A0507D: ??? ==933871== by 0x1400C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933871== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933871== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933871== by 0xF566D38: PetscInitialize (pinit.c:924) ==933871== by 0xE7F4FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933871== by 0xE7F501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933871== by 0x22565C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933871== by 0x21ECDF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933871== by 0x22284A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933871== by 0x2226EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933871== by 0x222D81: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933871== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==933871== ==933871== Open file descriptor 8: /dev/shm/open_mpi.0000 ==933871== at 0xF01BBCC: __open_nocancel (open64_nocancel.c:39) ==933871== by 0xEF9FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==933871== by 0xE829822: ??? ==933871== by 0xE82996F: ??? ==933871== by 0x140B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933871== by 0x140B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933871== by 0x14067922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==933871== by 0x1400C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==933871== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933871== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==933871== by 0xF566D38: PetscInitialize (pinit.c:924) ==933871== by 0xE7F4FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==933871== by 0xE7F501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==933871== by 0x22565C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==933871== by 0x21ECDF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==933871== by 0x22284A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==933871== by 0x2226EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==933871== by 0x222D81: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==933871== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==933871== ==933871== Open file descriptor 116: ==933871== ==933871== ==933871== Open file descriptor 112: ==933871== ==933871== ==933871== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==933871== ==933871== ==933871== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==933871== ==933871== ==933871== ==933871== HEAP SUMMARY: ==933871== in use at exit: 700,686 bytes in 9,374 blocks ==933871== total heap usage: 7,509,423 allocs, 7,500,049 frees, 2,662,267,235 bytes allocated ==933871== ==933871== LEAK SUMMARY: ==933871== definitely lost: 0 bytes in 0 blocks ==933871== indirectly lost: 0 bytes in 0 blocks ==933871== possibly lost: 0 bytes in 0 blocks ==933871== still reachable: 56 bytes in 3 blocks ==933871== suppressed: 700,630 bytes in 9,371 blocks ==933871== Reachable blocks (those to which a pointer was found) are not shown. ==933871== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==933871== ==933871== For lists of detected and suppressed errors, rerun with: -s ==933871== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)