==934351== Memcheck, a memory error detector ==934351== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==934351== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==934351== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==934351== Parent PID: 908152 ==934351== ==934351== ==934351== FILE DESCRIPTORS: 9 open (3 std) at exit. ==934351== Open file descriptor 12: ==934351== at 0xF0F722D: pipe (pipe.c:29) ==934351== by 0x18A0507D: ??? ==934351== by 0x141304CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==934351== by 0x10D52418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==934351== by 0x10CEBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==934351== by 0xF9E2D38: PetscInitialize (pinit.c:924) ==934351== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==934351== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==934351== by 0x1D25D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==934351== by 0x1CBF69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==934351== by 0x1CF704: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==934351== by 0x1CF5A4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==934351== by 0x1CFC3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==934351== by 0x1CA255: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==934351== ==934351== Open file descriptor 8: /dev/shm/open_mpi.0000 ==934351== at 0xF0FBBCC: __open_nocancel (open64_nocancel.c:39) ==934351== by 0xF07FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==934351== by 0xE48D822: ??? ==934351== by 0xE48D96F: ??? ==934351== by 0x141D56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==934351== by 0x141D5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==934351== by 0x1418B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==934351== by 0x141302DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==934351== by 0x10D52418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==934351== by 0x10CEBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==934351== by 0xF9E2D38: PetscInitialize (pinit.c:924) ==934351== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==934351== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==934351== by 0x1D25D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==934351== by 0x1CBF69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==934351== by 0x1CF704: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==934351== by 0x1CF5A4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==934351== by 0x1CFC3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==934351== by 0x1CA255: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==934351== ==934351== Open file descriptor 116: ==934351== ==934351== ==934351== Open file descriptor 112: ==934351== ==934351== ==934351== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==934351== ==934351== ==934351== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==934351== ==934351== ==934351== ==934351== HEAP SUMMARY: ==934351== in use at exit: 700,686 bytes in 9,374 blocks ==934351== total heap usage: 7,097,299 allocs, 7,087,925 frees, 8,099,003,545 bytes allocated ==934351== ==934351== LEAK SUMMARY: ==934351== definitely lost: 0 bytes in 0 blocks ==934351== indirectly lost: 0 bytes in 0 blocks ==934351== possibly lost: 0 bytes in 0 blocks ==934351== still reachable: 56 bytes in 3 blocks ==934351== suppressed: 700,630 bytes in 9,371 blocks ==934351== Reachable blocks (those to which a pointer was found) are not shown. ==934351== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==934351== ==934351== For lists of detected and suppressed errors, rerun with: -s ==934351== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)