==946542== Memcheck, a memory error detector ==946542== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==946542== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==946542== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==946542== Parent PID: 908152 ==946542== ==946542== ==946542== FILE DESCRIPTORS: 9 open (3 std) at exit. ==946542== Open file descriptor 12: ==946542== at 0xEC7B22D: pipe (pipe.c:29) ==946542== by 0x18A0507D: ??? ==946542== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==946542== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==946542== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==946542== by 0xF566D38: PetscInitialize (pinit.c:924) ==946542== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==946542== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==946542== by 0x1D69EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==946542== by 0x1CE2C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==946542== by 0x1D1B48: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==946542== by 0x1D19E8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==946542== by 0x1D207F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==946542== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==946542== ==946542== Open file descriptor 8: /dev/shm/open_mpi.0000 ==946542== at 0xEC7FBCC: __open_nocancel (open64_nocancel.c:39) ==946542== by 0xEC03C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==946542== by 0xE48D822: ??? ==946542== by 0xE48D96F: ??? ==946542== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==946542== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==946542== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==946542== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==946542== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==946542== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==946542== by 0xF566D38: PetscInitialize (pinit.c:924) ==946542== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==946542== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==946542== by 0x1D69EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==946542== by 0x1CE2C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==946542== by 0x1D1B48: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==946542== by 0x1D19E8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==946542== by 0x1D207F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==946542== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==946542== ==946542== Open file descriptor 116: ==946542== ==946542== ==946542== Open file descriptor 112: ==946542== ==946542== ==946542== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==946542== ==946542== ==946542== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==946542== ==946542== ==946542== ==946542== HEAP SUMMARY: ==946542== in use at exit: 700,702 bytes in 9,375 blocks ==946542== total heap usage: 11,683,901 allocs, 11,674,526 frees, 2,223,638,215 bytes allocated ==946542== ==946542== LEAK SUMMARY: ==946542== definitely lost: 0 bytes in 0 blocks ==946542== indirectly lost: 0 bytes in 0 blocks ==946542== possibly lost: 0 bytes in 0 blocks ==946542== still reachable: 72 bytes in 4 blocks ==946542== suppressed: 700,630 bytes in 9,371 blocks ==946542== Reachable blocks (those to which a pointer was found) are not shown. ==946542== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==946542== ==946542== For lists of detected and suppressed errors, rerun with: -s ==946542== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)