==947888== Memcheck, a memory error detector ==947888== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==947888== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==947888== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==947888== Parent PID: 908152 ==947888== ==947888== ==947888== FILE DESCRIPTORS: 9 open (3 std) at exit. ==947888== Open file descriptor 12: ==947888== at 0x118C722D: pipe (pipe.c:29) ==947888== by 0x1A6C707D: ??? ==947888== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==947888== by 0x111D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947888== by 0x1116AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947888== by 0xFE41D38: PetscInitialize (pinit.c:924) ==947888== by 0xFD18FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==947888== by 0xFD1901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==947888== by 0x123E51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==947888== by 0x11F733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==947888== by 0x12199C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==947888== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==947888== by 0x121EAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==947888== by 0x11DF35: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==947888== ==947888== Open file descriptor 8: /dev/shm/open_mpi.0000 ==947888== at 0x118CBBCC: __open_nocancel (open64_nocancel.c:39) ==947888== by 0x1184FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==947888== by 0x110CB822: ??? ==947888== by 0x110CB96F: ??? ==947888== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==947888== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==947888== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==947888== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==947888== by 0x111D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947888== by 0x1116AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947888== by 0xFE41D38: PetscInitialize (pinit.c:924) ==947888== by 0xFD18FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==947888== by 0xFD1901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==947888== by 0x123E51: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==947888== by 0x11F733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==947888== by 0x12199C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==947888== by 0x121898: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==947888== by 0x121EAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==947888== by 0x11DF35: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==947888== ==947888== Open file descriptor 116: ==947888== ==947888== ==947888== Open file descriptor 112: ==947888== ==947888== ==947888== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==947888== ==947888== ==947888== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==947888== ==947888== ==947888== ==947888== HEAP SUMMARY: ==947888== in use at exit: 700,702 bytes in 9,374 blocks ==947888== total heap usage: 16,187,980 allocs, 16,178,606 frees, 2,845,003,310 bytes allocated ==947888== ==947888== LEAK SUMMARY: ==947888== definitely lost: 0 bytes in 0 blocks ==947888== indirectly lost: 0 bytes in 0 blocks ==947888== possibly lost: 0 bytes in 0 blocks ==947888== still reachable: 56 bytes in 3 blocks ==947888== suppressed: 700,646 bytes in 9,371 blocks ==947888== Reachable blocks (those to which a pointer was found) are not shown. ==947888== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==947888== ==947888== For lists of detected and suppressed errors, rerun with: -s ==947888== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)