==947283== Memcheck, a memory error detector ==947283== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==947283== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==947283== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==947283== Parent PID: 908152 ==947283== ==947283== ==947283== FILE DESCRIPTORS: 9 open (3 std) at exit. ==947283== Open file descriptor 12: ==947283== at 0x1000722D: pipe (pipe.c:29) ==947283== by 0x18A0507D: ??? ==947283== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==947283== by 0xF911418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947283== by 0xF8AAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947283== by 0xE581D38: PetscInitialize (pinit.c:924) ==947283== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==947283== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==947283== by 0x1213C1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==947283== by 0x11C9A5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==947283== by 0x11EF94: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==947283== by 0x11EE34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==947283== by 0x11F4CB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==947283== by 0x11ACD5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==947283== ==947283== Open file descriptor 8: /dev/shm/open_mpi.0000 ==947283== at 0x1000BBCC: __open_nocancel (open64_nocancel.c:39) ==947283== by 0xFF8FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==947283== by 0xF80B822: ??? ==947283== by 0xF80B96F: ??? ==947283== by 0x1400D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==947283== by 0x1400D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==947283== by 0x13FC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==947283== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==947283== by 0xF911418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947283== by 0xF8AAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947283== by 0xE581D38: PetscInitialize (pinit.c:924) ==947283== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==947283== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==947283== by 0x1213C1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==947283== by 0x11C9A5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==947283== by 0x11EF94: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==947283== by 0x11EE34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==947283== by 0x11F4CB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==947283== by 0x11ACD5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==947283== ==947283== Open file descriptor 116: ==947283== ==947283== ==947283== Open file descriptor 112: ==947283== ==947283== ==947283== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==947283== ==947283== ==947283== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==947283== ==947283== ==947283== ==947283== HEAP SUMMARY: ==947283== in use at exit: 700,686 bytes in 9,374 blocks ==947283== total heap usage: 3,339,547 allocs, 3,330,173 frees, 2,282,270,863 bytes allocated ==947283== ==947283== LEAK SUMMARY: ==947283== definitely lost: 0 bytes in 0 blocks ==947283== indirectly lost: 0 bytes in 0 blocks ==947283== possibly lost: 0 bytes in 0 blocks ==947283== still reachable: 56 bytes in 3 blocks ==947283== suppressed: 700,630 bytes in 9,371 blocks ==947283== Reachable blocks (those to which a pointer was found) are not shown. ==947283== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==947283== ==947283== For lists of detected and suppressed errors, rerun with: -s ==947283== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)