==947538== Memcheck, a memory error detector ==947538== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==947538== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==947538== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==947538== Parent PID: 908152 ==947538== ==947538== ==947538== FILE DESCRIPTORS: 9 open (3 std) at exit. ==947538== Open file descriptor 12: ==947538== at 0x11B4C22D: pipe (pipe.c:29) ==947538== by 0x1A6C607D: ??? ==947538== by 0x1587B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==947538== by 0x11458418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947538== by 0x113F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947538== by 0x100E6D38: PetscInitialize (pinit.c:924) ==947538== by 0xFF5BFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==947538== by 0xFF5C01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==947538== by 0x135B81: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==947538== by 0x130475: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==947538== by 0x133224: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==947538== by 0x1330C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==947538== by 0x13375B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==947538== by 0x12E7A5: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==947538== ==947538== Open file descriptor 8: /dev/shm/open_mpi.0000 ==947538== at 0x11B50BCC: __open_nocancel (open64_nocancel.c:39) ==947538== by 0x11AD4C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==947538== by 0xFF90822: ??? ==947538== by 0xFF9096F: ??? ==947538== by 0x159206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==947538== by 0x15920938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==947538== by 0x158D6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==947538== by 0x1587B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==947538== by 0x11458418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947538== by 0x113F1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==947538== by 0x100E6D38: PetscInitialize (pinit.c:924) ==947538== by 0xFF5BFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==947538== by 0xFF5C01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==947538== by 0x135B81: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==947538== by 0x130475: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==947538== by 0x133224: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==947538== by 0x1330C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==947538== by 0x13375B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==947538== by 0x12E7A5: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==947538== ==947538== Open file descriptor 116: ==947538== ==947538== ==947538== Open file descriptor 112: ==947538== ==947538== ==947538== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==947538== ==947538== ==947538== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==947538== ==947538== ==947538== ==947538== HEAP SUMMARY: ==947538== in use at exit: 700,738 bytes in 9,377 blocks ==947538== total heap usage: 521,210 allocs, 511,833 frees, 1,562,159,131 bytes allocated ==947538== ==947538== LEAK SUMMARY: ==947538== definitely lost: 0 bytes in 0 blocks ==947538== indirectly lost: 0 bytes in 0 blocks ==947538== possibly lost: 0 bytes in 0 blocks ==947538== still reachable: 24 bytes in 2 blocks ==947538== suppressed: 700,714 bytes in 9,375 blocks ==947538== Reachable blocks (those to which a pointer was found) are not shown. ==947538== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==947538== ==947538== For lists of detected and suppressed errors, rerun with: -s ==947538== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)