==1009359== Memcheck, a memory error detector ==1009359== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1009359== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1009359== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==1009359== Parent PID: 992963 ==1009359== ==1009359== ==1009359== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1009359== Open file descriptor 12: ==1009359== at 0xBD4222D: pipe (pipe.c:29) ==1009359== by 0x13F8307D: ??? ==1009359== by 0xF7384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1009359== by 0xB632418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1009359== by 0xB5CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1009359== by 0xA2C2D38: PetscInitialize (pinit.c:924) ==1009359== by 0xA135FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1009359== by 0xA13601D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1009359== by 0x14093E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1009359== by 0x13A0F5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1009359== by 0x13D7D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1009359== by 0x13D670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1009359== by 0x13DD07: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1009359== by 0x138285: main (TestBidomainProblem.cpp:19) ==1009359== ==1009359== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1009359== at 0xBD46BCC: __open_nocancel (open64_nocancel.c:39) ==1009359== by 0xBCCAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1009359== by 0xA16A822: ??? ==1009359== by 0xA16A96F: ??? ==1009359== by 0xF7DD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1009359== by 0xF7DD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1009359== by 0xF793922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1009359== by 0xF7382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1009359== by 0xB632418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1009359== by 0xB5CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1009359== by 0xA2C2D38: PetscInitialize (pinit.c:924) ==1009359== by 0xA135FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1009359== by 0xA13601D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1009359== by 0x14093E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1009359== by 0x13A0F5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1009359== by 0x13D7D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1009359== by 0x13D670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1009359== by 0x13DD07: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1009359== by 0x138285: main (TestBidomainProblem.cpp:19) ==1009359== ==1009359== Open file descriptor 118: ==1009359== ==1009359== ==1009359== Open file descriptor 115: ==1009359== ==1009359== ==1009359== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==1009359== ==1009359== ==1009359== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1009359== ==1009359== ==1009359== ==1009359== HEAP SUMMARY: ==1009359== in use at exit: 701,223 bytes in 9,387 blocks ==1009359== total heap usage: 588,778 allocs, 579,391 frees, 1,564,816,080 bytes allocated ==1009359== ==1009359== LEAK SUMMARY: ==1009359== definitely lost: 0 bytes in 0 blocks ==1009359== indirectly lost: 0 bytes in 0 blocks ==1009359== possibly lost: 0 bytes in 0 blocks ==1009359== still reachable: 24 bytes in 2 blocks ==1009359== suppressed: 701,199 bytes in 9,385 blocks ==1009359== Reachable blocks (those to which a pointer was found) are not shown. ==1009359== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1009359== ==1009359== For lists of detected and suppressed errors, rerun with: -s ==1009359== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)