==1008289== Memcheck, a memory error detector ==1008289== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1008289== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1008289== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==1008289== Parent PID: 992963 ==1008289== ==1008289== ==1008289== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1008289== Open file descriptor 12: ==1008289== at 0x1037122D: pipe (pipe.c:29) ==1008289== by 0x18A0307D: ??? ==1008289== by 0x13FB74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1008289== by 0xFB94418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1008289== by 0xFB2DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1008289== by 0xE824D38: PetscInitialize (pinit.c:924) ==1008289== by 0xE699FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1008289== by 0xE69A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1008289== by 0x261BC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1008289== by 0x25A2EB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1008289== by 0x25EE6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1008289== by 0x25ED0F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1008289== by 0x25F3A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1008289== by 0x255E15: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1008289== ==1008289== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1008289== at 0x10375BCC: __open_nocancel (open64_nocancel.c:39) ==1008289== by 0x102F9C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1008289== by 0xE6CE822: ??? ==1008289== by 0xE6CE96F: ??? ==1008289== by 0x1405E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1008289== by 0x1405E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1008289== by 0x14014922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1008289== by 0x13FB72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1008289== by 0xFB94418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1008289== by 0xFB2DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1008289== by 0xE824D38: PetscInitialize (pinit.c:924) ==1008289== by 0xE699FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1008289== by 0xE69A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1008289== by 0x261BC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1008289== by 0x25A2EB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1008289== by 0x25EE6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1008289== by 0x25ED0F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1008289== by 0x25F3A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1008289== by 0x255E15: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1008289== ==1008289== Open file descriptor 118: ==1008289== ==1008289== ==1008289== Open file descriptor 115: ==1008289== ==1008289== ==1008289== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==1008289== ==1008289== ==1008289== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1008289== ==1008289== ==1008289== ==1008289== HEAP SUMMARY: ==1008289== in use at exit: 700,688 bytes in 9,374 blocks ==1008289== total heap usage: 3,820,550 allocs, 3,811,176 frees, 1,524,931,094 bytes allocated ==1008289== ==1008289== LEAK SUMMARY: ==1008289== definitely lost: 0 bytes in 0 blocks ==1008289== indirectly lost: 0 bytes in 0 blocks ==1008289== possibly lost: 0 bytes in 0 blocks ==1008289== still reachable: 56 bytes in 3 blocks ==1008289== suppressed: 700,632 bytes in 9,371 blocks ==1008289== Reachable blocks (those to which a pointer was found) are not shown. ==1008289== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1008289== ==1008289== For lists of detected and suppressed errors, rerun with: -s ==1008289== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)