==994958== Memcheck, a memory error detector ==994958== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==994958== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==994958== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==994958== Parent PID: 992963 ==994958== ==994958== ==994958== FILE DESCRIPTORS: 9 open (3 std) at exit. ==994958== Open file descriptor 12: ==994958== at 0xEC7922D: pipe (pipe.c:29) ==994958== by 0x18A0307D: ??? ==994958== by 0x140064CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==994958== by 0x108D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994958== by 0x1086DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994958== by 0xF564D38: PetscInitialize (pinit.c:924) ==994958== by 0xE456FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==994958== by 0xE45701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==994958== by 0x31195C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==994958== by 0x307C49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==994958== by 0x30C050: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==994958== by 0x30BEF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==994958== by 0x30C587: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==994958== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==994958== ==994958== Open file descriptor 8: /dev/shm/open_mpi.0000 ==994958== at 0xEC7DBCC: __open_nocancel (open64_nocancel.c:39) ==994958== by 0xEC01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==994958== by 0xE48B822: ??? ==994958== by 0xE48B96F: ??? ==994958== by 0x140AB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994958== by 0x140AB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994958== by 0x14061922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==994958== by 0x140062DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==994958== by 0x108D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994958== by 0x1086DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==994958== by 0xF564D38: PetscInitialize (pinit.c:924) ==994958== by 0xE456FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==994958== by 0xE45701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==994958== by 0x31195C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==994958== by 0x307C49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==994958== by 0x30C050: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==994958== by 0x30BEF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==994958== by 0x30C587: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==994958== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==994958== ==994958== Open file descriptor 118: ==994958== ==994958== ==994958== Open file descriptor 115: ==994958== ==994958== ==994958== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==994958== ==994958== ==994958== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==994958== ==994958== ==994958== ==994958== HEAP SUMMARY: ==994958== in use at exit: 700,686 bytes in 9,374 blocks ==994958== total heap usage: 12,851,129 allocs, 12,841,755 frees, 3,876,748,286 bytes allocated ==994958== ==994958== LEAK SUMMARY: ==994958== definitely lost: 0 bytes in 0 blocks ==994958== indirectly lost: 0 bytes in 0 blocks ==994958== possibly lost: 0 bytes in 0 blocks ==994958== still reachable: 56 bytes in 3 blocks ==994958== suppressed: 700,630 bytes in 9,371 blocks ==994958== Reachable blocks (those to which a pointer was found) are not shown. ==994958== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==994958== ==994958== For lists of detected and suppressed errors, rerun with: -s ==994958== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)