==1064995== Memcheck, a memory error detector ==1064995== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1064995== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1064995== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1064995== Parent PID: 1049211 ==1064995== ==1064995== ==1064995== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1064995== Open file descriptor 12: ==1064995== at 0x1190722D: pipe (pipe.c:29) ==1064995== by 0x1A6C407D: ??? ==1064995== by 0x158284CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1064995== by 0x11211418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1064995== by 0x111AAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1064995== by 0xFEA1D38: PetscInitialize (pinit.c:924) ==1064995== by 0xFD16FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1064995== by 0xFD1701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1064995== by 0x2247F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1064995== by 0x21BFC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1064995== by 0x21FBD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1064995== by 0x21FA70: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1064995== by 0x220107: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1064995== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1064995== ==1064995== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1064995== at 0x1190BBCC: __open_nocancel (open64_nocancel.c:39) ==1064995== by 0x1188FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1064995== by 0xFD4B822: ??? ==1064995== by 0xFD4B96F: ??? ==1064995== by 0x158CD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1064995== by 0x158CD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1064995== by 0x15883922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1064995== by 0x158282DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1064995== by 0x11211418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1064995== by 0x111AAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1064995== by 0xFEA1D38: PetscInitialize (pinit.c:924) ==1064995== by 0xFD16FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1064995== by 0xFD1701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1064995== by 0x2247F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1064995== by 0x21BFC9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1064995== by 0x21FBD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1064995== by 0x21FA70: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1064995== by 0x220107: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1064995== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1064995== ==1064995== Open file descriptor 116: ==1064995== ==1064995== ==1064995== Open file descriptor 112: ==1064995== ==1064995== ==1064995== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==1064995== ==1064995== ==1064995== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1064995== ==1064995== ==1064995== ==1064995== HEAP SUMMARY: ==1064995== in use at exit: 700,704 bytes in 9,374 blocks ==1064995== total heap usage: 3,719,994 allocs, 3,710,620 frees, 1,636,715,653 bytes allocated ==1064995== ==1064995== LEAK SUMMARY: ==1064995== definitely lost: 0 bytes in 0 blocks ==1064995== indirectly lost: 0 bytes in 0 blocks ==1064995== possibly lost: 0 bytes in 0 blocks ==1064995== still reachable: 56 bytes in 3 blocks ==1064995== suppressed: 700,648 bytes in 9,371 blocks ==1064995== Reachable blocks (those to which a pointer was found) are not shown. ==1064995== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1064995== ==1064995== For lists of detected and suppressed errors, rerun with: -s ==1064995== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)