==1051168== Memcheck, a memory error detector ==1051168== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1051168== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1051168== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==1051168== Parent PID: 1049211 ==1051168== ==1051168== ==1051168== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1051168== Open file descriptor 12: ==1051168== at 0xEC7922D: pipe (pipe.c:29) ==1051168== by 0x18A0307D: ??? ==1051168== by 0x140064CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1051168== by 0x108D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1051168== by 0x1086DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1051168== by 0xF564D38: PetscInitialize (pinit.c:924) ==1051168== by 0xE456FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1051168== by 0xE45701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1051168== by 0x31195C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1051168== by 0x307C49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1051168== by 0x30C050: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1051168== by 0x30BEF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1051168== by 0x30C587: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1051168== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==1051168== ==1051168== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1051168== at 0xEC7DBCC: __open_nocancel (open64_nocancel.c:39) ==1051168== by 0xEC01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1051168== by 0xE48B822: ??? ==1051168== by 0xE48B96F: ??? ==1051168== by 0x140AB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1051168== by 0x140AB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1051168== by 0x14061922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1051168== by 0x140062DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1051168== by 0x108D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1051168== by 0x1086DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1051168== by 0xF564D38: PetscInitialize (pinit.c:924) ==1051168== by 0xE456FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1051168== by 0xE45701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1051168== by 0x31195C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1051168== by 0x307C49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1051168== by 0x30C050: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1051168== by 0x30BEF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1051168== by 0x30C587: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1051168== by 0x305F35: main (TestOffLatticeSimulation.cpp:19) ==1051168== ==1051168== Open file descriptor 116: ==1051168== ==1051168== ==1051168== Open file descriptor 112: ==1051168== ==1051168== ==1051168== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==1051168== ==1051168== ==1051168== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1051168== ==1051168== ==1051168== ==1051168== HEAP SUMMARY: ==1051168== in use at exit: 700,688 bytes in 9,374 blocks ==1051168== total heap usage: 12,851,127 allocs, 12,841,753 frees, 3,876,752,355 bytes allocated ==1051168== ==1051168== LEAK SUMMARY: ==1051168== definitely lost: 0 bytes in 0 blocks ==1051168== indirectly lost: 0 bytes in 0 blocks ==1051168== possibly lost: 0 bytes in 0 blocks ==1051168== still reachable: 56 bytes in 3 blocks ==1051168== suppressed: 700,632 bytes in 9,371 blocks ==1051168== Reachable blocks (those to which a pointer was found) are not shown. ==1051168== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1051168== ==1051168== For lists of detected and suppressed errors, rerun with: -s ==1051168== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)