==1125788== Memcheck, a memory error detector ==1125788== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1125788== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1125788== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==1125788== Parent PID: 1108645 ==1125788== ==1125788== ==1125788== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1125788== Open file descriptor 12: ==1125788== at 0x856A22D: pipe (pipe.c:29) ==1125788== by 0x13F8007D: ??? ==1125788== by 0xEA794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1125788== by 0x9C64418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1125788== by 0x9BFDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1125788== by 0x88F4D38: PetscInitialize (pinit.c:924) ==1125788== by 0x819BFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1125788== by 0x819C01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1125788== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1125788== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1125788== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1125788== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1125788== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1125788== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==1125788== ==1125788== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1125788== at 0x856EBCC: __open_nocancel (open64_nocancel.c:39) ==1125788== by 0x84F2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1125788== by 0x81D0822: ??? ==1125788== by 0x81D096F: ??? ==1125788== by 0xEB1E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1125788== by 0xEB1E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1125788== by 0xEAD4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1125788== by 0xEA792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1125788== by 0x9C64418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1125788== by 0x9BFDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1125788== by 0x88F4D38: PetscInitialize (pinit.c:924) ==1125788== by 0x819BFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1125788== by 0x819C01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1125788== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1125788== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1125788== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1125788== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1125788== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1125788== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==1125788== ==1125788== Open file descriptor 116: ==1125788== ==1125788== ==1125788== Open file descriptor 112: ==1125788== ==1125788== ==1125788== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==1125788== ==1125788== ==1125788== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1125788== ==1125788== ==1125788== ==1125788== HEAP SUMMARY: ==1125788== in use at exit: 700,743 bytes in 9,377 blocks ==1125788== total heap usage: 51,136 allocs, 41,759 frees, 1,353,603,778 bytes allocated ==1125788== ==1125788== LEAK SUMMARY: ==1125788== definitely lost: 0 bytes in 0 blocks ==1125788== indirectly lost: 0 bytes in 0 blocks ==1125788== possibly lost: 0 bytes in 0 blocks ==1125788== still reachable: 24 bytes in 2 blocks ==1125788== suppressed: 700,719 bytes in 9,375 blocks ==1125788== Reachable blocks (those to which a pointer was found) are not shown. ==1125788== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1125788== ==1125788== For lists of detected and suppressed errors, rerun with: -s ==1125788== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)