==1108909== Memcheck, a memory error detector ==1108909== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1108909== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1108909== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestParallelColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==1108909== Parent PID: 1108645 ==1108909== ==1108909== ==1108909== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1108909== Open file descriptor 12: ==1108909== at 0x609F22D: pipe (pipe.c:29) ==1108909== by 0xAF1407D: ??? ==1108909== by 0x8F344CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1108909== by 0x664E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1108909== by 0x65E7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1108909== by 0x4A95D38: PetscInitialize (pinit.c:924) ==1108909== by 0x496CFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1108909== by 0x496D01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1108909== by 0x11B6B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1108909== by 0x114B45: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1108909== by 0x1175D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1108909== by 0x117470: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1108909== by 0x117B07: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1108909== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==1108909== ==1108909== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1108909== at 0x60A3BCC: __open_nocancel (open64_nocancel.c:39) ==1108909== by 0x6027C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1108909== by 0x5D1F822: ??? ==1108909== by 0x5D1F96F: ??? ==1108909== by 0x8FD96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1108909== by 0x8FD9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1108909== by 0x8F8F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1108909== by 0x8F342DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1108909== by 0x664E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1108909== by 0x65E7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1108909== by 0x4A95D38: PetscInitialize (pinit.c:924) ==1108909== by 0x496CFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1108909== by 0x496D01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1108909== by 0x11B6B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1108909== by 0x114B45: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1108909== by 0x1175D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1108909== by 0x117470: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1108909== by 0x117B07: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1108909== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==1108909== ==1108909== Open file descriptor 116: ==1108909== ==1108909== ==1108909== Open file descriptor 112: ==1108909== ==1108909== ==1108909== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParallelColumnDataReaderWriter_valgrind.txt ==1108909== ==1108909== ==1108909== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1108909== ==1108909== ==1108909== ==1108909== HEAP SUMMARY: ==1108909== in use at exit: 700,279 bytes in 9,377 blocks ==1108909== total heap usage: 48,422 allocs, 39,045 frees, 1,353,874,838 bytes allocated ==1108909== ==1108909== LEAK SUMMARY: ==1108909== definitely lost: 0 bytes in 0 blocks ==1108909== indirectly lost: 0 bytes in 0 blocks ==1108909== possibly lost: 0 bytes in 0 blocks ==1108909== still reachable: 24 bytes in 2 blocks ==1108909== suppressed: 700,255 bytes in 9,375 blocks ==1108909== Reachable blocks (those to which a pointer was found) are not shown. ==1108909== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1108909== ==1108909== For lists of detected and suppressed errors, rerun with: -s ==1108909== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)