==1109338== Memcheck, a memory error detector ==1109338== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1109338== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1109338== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestVertexMeshReader -malloc_debug -malloc_dump -memory_info ==1109338== Parent PID: 1108645 ==1109338== ==1109338== ==1109338== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1109338== Open file descriptor 12: ==1109338== at 0x656522D: pipe (pipe.c:29) ==1109338== by 0xFD1D07D: ??? ==1109338== by 0xB6544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1109338== by 0x7BB0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109338== by 0x7B49D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109338== by 0x683ED38: PetscInitialize (pinit.c:924) ==1109338== by 0x61B0FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1109338== by 0x61B101D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1109338== by 0x1206D8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1109338== by 0x11B645: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1109338== by 0x11E71A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1109338== by 0x11E5BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1109338== by 0x11EC51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1109338== by 0x119975: main (TestVertexMeshReader.cpp:19) ==1109338== ==1109338== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1109338== at 0x6569BCC: __open_nocancel (open64_nocancel.c:39) ==1109338== by 0x64EDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1109338== by 0x61E5822: ??? ==1109338== by 0x61E596F: ??? ==1109338== by 0xB6F96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109338== by 0xB6F9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109338== by 0xB6AF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109338== by 0xB6542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1109338== by 0x7BB0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109338== by 0x7B49D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109338== by 0x683ED38: PetscInitialize (pinit.c:924) ==1109338== by 0x61B0FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1109338== by 0x61B101D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1109338== by 0x1206D8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1109338== by 0x11B645: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1109338== by 0x11E71A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1109338== by 0x11E5BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1109338== by 0x11EC51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1109338== by 0x119975: main (TestVertexMeshReader.cpp:19) ==1109338== ==1109338== Open file descriptor 116: ==1109338== ==1109338== ==1109338== Open file descriptor 112: ==1109338== ==1109338== ==1109338== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexMeshReader_valgrind.txt ==1109338== ==1109338== ==1109338== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1109338== ==1109338== ==1109338== ==1109338== HEAP SUMMARY: ==1109338== in use at exit: 700,631 bytes in 9,377 blocks ==1109338== total heap usage: 49,968 allocs, 40,591 frees, 1,353,856,397 bytes allocated ==1109338== ==1109338== LEAK SUMMARY: ==1109338== definitely lost: 0 bytes in 0 blocks ==1109338== indirectly lost: 0 bytes in 0 blocks ==1109338== possibly lost: 0 bytes in 0 blocks ==1109338== still reachable: 24 bytes in 2 blocks ==1109338== suppressed: 700,607 bytes in 9,375 blocks ==1109338== Reachable blocks (those to which a pointer was found) are not shown. ==1109338== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1109338== ==1109338== For lists of detected and suppressed errors, rerun with: -s ==1109338== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)