==1109319== Memcheck, a memory error detector ==1109319== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1109319== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1109319== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestVertexMesh -malloc_debug -malloc_dump -memory_info ==1109319== Parent PID: 1108645 ==1109319== ==1109319== ==1109319== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1109319== Open file descriptor 12: ==1109319== at 0x7E8A22D: pipe (pipe.c:29) ==1109319== by 0xFD1D07D: ??? ==1109319== by 0xB6544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1109319== by 0x76AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109319== by 0x7646D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109319== by 0x633DD38: PetscInitialize (pinit.c:924) ==1109319== by 0x61B0FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1109319== by 0x61B101D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1109319== by 0x143845: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1109319== by 0x13DC15: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1109319== by 0x141492: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1109319== by 0x141332: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1109319== by 0x1419C9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1109319== by 0x13BF45: main (TestVertexMesh.cpp:19) ==1109319== ==1109319== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1109319== at 0x7E8EBCC: __open_nocancel (open64_nocancel.c:39) ==1109319== by 0x7E12C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1109319== by 0x61E5822: ??? ==1109319== by 0x61E596F: ??? ==1109319== by 0xB6F96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109319== by 0xB6F9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109319== by 0xB6AF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109319== by 0xB6542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1109319== by 0x76AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109319== by 0x7646D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109319== by 0x633DD38: PetscInitialize (pinit.c:924) ==1109319== by 0x61B0FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1109319== by 0x61B101D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1109319== by 0x143845: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1109319== by 0x13DC15: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1109319== by 0x141492: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1109319== by 0x141332: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1109319== by 0x1419C9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1109319== by 0x13BF45: main (TestVertexMesh.cpp:19) ==1109319== ==1109319== Open file descriptor 116: ==1109319== ==1109319== ==1109319== Open file descriptor 112: ==1109319== ==1109319== ==1109319== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexMesh_valgrind.txt ==1109319== ==1109319== ==1109319== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1109319== ==1109319== ==1109319== ==1109319== HEAP SUMMARY: ==1109319== in use at exit: 703,183 bytes in 9,378 blocks ==1109319== total heap usage: 95,619 allocs, 86,241 frees, 1,361,527,456 bytes allocated ==1109319== ==1109319== LEAK SUMMARY: ==1109319== definitely lost: 0 bytes in 0 blocks ==1109319== indirectly lost: 0 bytes in 0 blocks ==1109319== possibly lost: 0 bytes in 0 blocks ==1109319== still reachable: 2,576 bytes in 3 blocks ==1109319== suppressed: 700,607 bytes in 9,375 blocks ==1109319== Reachable blocks (those to which a pointer was found) are not shown. ==1109319== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1109319== ==1109319== For lists of detected and suppressed errors, rerun with: -s ==1109319== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)