==1165870== Memcheck, a memory error detector ==1165870== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1165870== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1165870== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdeSolver -malloc_debug -malloc_dump -memory_info ==1165870== Parent PID: 1164611 ==1165870== ==1165870== ==1165870== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1165870== Open file descriptor 12: ==1165870== at 0x103E022D: pipe (pipe.c:29) ==1165870== by 0x18A0407D: ??? ==1165870== by 0x140074CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1165870== by 0x108D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165870== by 0x1086DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165870== by 0xE9AAD38: PetscInitialize (pinit.c:924) ==1165870== by 0xE881FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1165870== by 0xE88201D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1165870== by 0x13C902: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1165870== by 0x137A13: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1165870== by 0x13A5BA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1165870== by 0x13A4B5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1165870== by 0x13AAC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1165870== by 0x136215: main (TestCellBasedEllipticPdeSolver.cpp:18) ==1165870== ==1165870== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1165870== at 0x103E4BCC: __open_nocancel (open64_nocancel.c:39) ==1165870== by 0x10368C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1165870== by 0xFC34822: ??? ==1165870== by 0xFC3496F: ??? ==1165870== by 0x140AC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1165870== by 0x140AC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1165870== by 0x14062922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1165870== by 0x140072DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1165870== by 0x108D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165870== by 0x1086DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165870== by 0xE9AAD38: PetscInitialize (pinit.c:924) ==1165870== by 0xE881FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1165870== by 0xE88201D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1165870== by 0x13C902: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1165870== by 0x137A13: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1165870== by 0x13A5BA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1165870== by 0x13A4B5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1165870== by 0x13AAC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1165870== by 0x136215: main (TestCellBasedEllipticPdeSolver.cpp:18) ==1165870== ==1165870== Open file descriptor 116: ==1165870== ==1165870== ==1165870== Open file descriptor 112: ==1165870== ==1165870== ==1165870== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdeSolver_valgrind.txt ==1165870== ==1165870== ==1165870== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1165870== ==1165870== ==1165870== ==1165870== HEAP SUMMARY: ==1165870== in use at exit: 700,727 bytes in 9,377 blocks ==1165870== total heap usage: 57,127 allocs, 47,750 frees, 1,354,479,359 bytes allocated ==1165870== ==1165870== LEAK SUMMARY: ==1165870== definitely lost: 0 bytes in 0 blocks ==1165870== indirectly lost: 0 bytes in 0 blocks ==1165870== possibly lost: 0 bytes in 0 blocks ==1165870== still reachable: 24 bytes in 2 blocks ==1165870== suppressed: 700,703 bytes in 9,375 blocks ==1165870== Reachable blocks (those to which a pointer was found) are not shown. ==1165870== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1165870== ==1165870== For lists of detected and suppressed errors, rerun with: -s ==1165870== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)