==1180381== Memcheck, a memory error detector ==1180381== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1180381== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1180381== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1180381== Parent PID: 1164611 ==1180381== ==1180381== ==1180381== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1180381== Open file descriptor 12: ==1180381== at 0x1053922D: pipe (pipe.c:29) ==1180381== by 0x1A6C607D: ??? ==1180381== by 0x158C64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1180381== by 0x12194418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1180381== by 0x1212DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1180381== by 0x10E24D38: PetscInitialize (pinit.c:924) ==1180381== by 0xFD16FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1180381== by 0xFD1701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1180381== by 0x23B7D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1180381== by 0x2319A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1180381== by 0x2360DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1180381== by 0x235F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1180381== by 0x236611: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1180381== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1180381== ==1180381== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1180381== at 0x1053DBCC: __open_nocancel (open64_nocancel.c:39) ==1180381== by 0x104C1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1180381== by 0xFD4B822: ??? ==1180381== by 0xFD4B96F: ??? ==1180381== by 0x1596D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1180381== by 0x1596D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1180381== by 0x15923922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1180381== by 0x158C62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1180381== by 0x12194418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1180381== by 0x1212DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1180381== by 0x10E24D38: PetscInitialize (pinit.c:924) ==1180381== by 0xFD16FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1180381== by 0xFD1701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1180381== by 0x23B7D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1180381== by 0x2319A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1180381== by 0x2360DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1180381== by 0x235F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1180381== by 0x236611: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1180381== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1180381== ==1180381== Open file descriptor 116: ==1180381== ==1180381== ==1180381== Open file descriptor 112: ==1180381== ==1180381== ==1180381== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==1180381== ==1180381== ==1180381== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1180381== ==1180381== ==1180381== ==1180381== HEAP SUMMARY: ==1180381== in use at exit: 700,704 bytes in 9,374 blocks ==1180381== total heap usage: 6,309,722 allocs, 6,300,348 frees, 2,072,748,920 bytes allocated ==1180381== ==1180381== LEAK SUMMARY: ==1180381== definitely lost: 0 bytes in 0 blocks ==1180381== indirectly lost: 0 bytes in 0 blocks ==1180381== possibly lost: 0 bytes in 0 blocks ==1180381== still reachable: 56 bytes in 3 blocks ==1180381== suppressed: 700,648 bytes in 9,371 blocks ==1180381== Reachable blocks (those to which a pointer was found) are not shown. ==1180381== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1180381== ==1180381== For lists of detected and suppressed errors, rerun with: -s ==1180381== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)