==1165884== Memcheck, a memory error detector ==1165884== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1165884== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1165884== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==1165884== Parent PID: 1164611 ==1165884== ==1165884== ==1165884== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1165884== Open file descriptor 12: ==1165884== at 0x103E322D: pipe (pipe.c:29) ==1165884== by 0x18A0407D: ??? ==1165884== by 0x13F674CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1165884== by 0xFCED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165884== by 0xFC86D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165884== by 0xE97DD38: PetscInitialize (pinit.c:924) ==1165884== by 0xE7F2FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1165884== by 0xE7F301D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1165884== by 0x139B6F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1165884== by 0x1345C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1165884== by 0x1371D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1165884== by 0x1370CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1165884== by 0x1376E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1165884== by 0x132DC5: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==1165884== ==1165884== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1165884== at 0x103E7BCC: __open_nocancel (open64_nocancel.c:39) ==1165884== by 0x1036BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1165884== by 0xE827822: ??? ==1165884== by 0xE82796F: ??? ==1165884== by 0x1400C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1165884== by 0x1400C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1165884== by 0x13FC2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1165884== by 0x13F672DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1165884== by 0xFCED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165884== by 0xFC86D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165884== by 0xE97DD38: PetscInitialize (pinit.c:924) ==1165884== by 0xE7F2FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1165884== by 0xE7F301D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1165884== by 0x139B6F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1165884== by 0x1345C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1165884== by 0x1371D4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1165884== by 0x1370CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1165884== by 0x1376E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1165884== by 0x132DC5: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==1165884== ==1165884== Open file descriptor 116: ==1165884== ==1165884== ==1165884== Open file descriptor 112: ==1165884== ==1165884== ==1165884== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==1165884== ==1165884== ==1165884== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1165884== ==1165884== ==1165884== ==1165884== HEAP SUMMARY: ==1165884== in use at exit: 700,688 bytes in 9,374 blocks ==1165884== total heap usage: 4,580,287 allocs, 4,570,913 frees, 1,926,424,363 bytes allocated ==1165884== ==1165884== LEAK SUMMARY: ==1165884== definitely lost: 0 bytes in 0 blocks ==1165884== indirectly lost: 0 bytes in 0 blocks ==1165884== possibly lost: 0 bytes in 0 blocks ==1165884== still reachable: 56 bytes in 3 blocks ==1165884== suppressed: 700,632 bytes in 9,371 blocks ==1165884== Reachable blocks (those to which a pointer was found) are not shown. ==1165884== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1165884== ==1165884== For lists of detected and suppressed errors, rerun with: -s ==1165884== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)