==1166168== Memcheck, a memory error detector ==1166168== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1166168== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1166168== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==1166168== Parent PID: 1164611 ==1166168== ==1166168== ==1166168== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1166168== Open file descriptor 12: ==1166168== at 0xE68E22D: pipe (pipe.c:29) ==1166168== by 0x18A0407D: ??? ==1166168== by 0x12FA54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1166168== by 0xE2DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1166168== by 0xE276D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1166168== by 0xCF6DD38: PetscInitialize (pinit.c:924) ==1166168== by 0xCDE2FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1166168== by 0xCDE301D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1166168== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1166168== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1166168== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1166168== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1166168== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1166168== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==1166168== ==1166168== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1166168== at 0xE692BCC: __open_nocancel (open64_nocancel.c:39) ==1166168== by 0xE616C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1166168== by 0xCE17822: ??? ==1166168== by 0xCE1796F: ??? ==1166168== by 0x1304A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1166168== by 0x1304A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1166168== by 0x13000922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1166168== by 0x12FA52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1166168== by 0xE2DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1166168== by 0xE276D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1166168== by 0xCF6DD38: PetscInitialize (pinit.c:924) ==1166168== by 0xCDE2FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1166168== by 0xCDE301D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1166168== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1166168== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1166168== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1166168== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1166168== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1166168== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==1166168== ==1166168== Open file descriptor 116: ==1166168== ==1166168== ==1166168== Open file descriptor 112: ==1166168== ==1166168== ==1166168== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==1166168== ==1166168== ==1166168== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1166168== ==1166168== ==1166168== ==1166168== HEAP SUMMARY: ==1166168== in use at exit: 700,727 bytes in 9,377 blocks ==1166168== total heap usage: 64,972 allocs, 55,595 frees, 1,354,996,784 bytes allocated ==1166168== ==1166168== LEAK SUMMARY: ==1166168== definitely lost: 0 bytes in 0 blocks ==1166168== indirectly lost: 0 bytes in 0 blocks ==1166168== possibly lost: 0 bytes in 0 blocks ==1166168== still reachable: 24 bytes in 2 blocks ==1166168== suppressed: 700,703 bytes in 9,375 blocks ==1166168== Reachable blocks (those to which a pointer was found) are not shown. ==1166168== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1166168== ==1166168== For lists of detected and suppressed errors, rerun with: -s ==1166168== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)